RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 TJP1Q07157 1748 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 NEDD4P46934 1319 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 VGLL3A8MV65 326 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 B4E1Z4 1266 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 SMAPO00193 183 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 HIP1RO75146 1068 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 HSD3B2P26439 372 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 MICU3Q86XE3 530 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 ABCC6O95255 1503 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 CDC27P30260 824 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 ADD2P35612 726 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 CCAR2Q8N163 923 aaKnown RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 MYL10Q9BUA6 226 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 CXorf56Q9H5V9 222 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 IFT122Q9HBG6 1241 aa13.44□□□□□ -0.26
SYNE2-207ENST00000458046 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
SYNE2-207ENST00000458046 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 VIL1P09327 827 aaKnown RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 CMA1P23946 247 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 NLRP12P59046 1061 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 C10orf62Q5T681 223 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 SNRNP27Q8WVK2 155 aaKnown RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 PIGBQ92521 554 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 ZNF532Q9HCE3 1301 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 DNAJA1P31689 397 aaKnown RBP13.43□□□□□ -0.26
SYNE2-207ENST00000458046 SLC39A14Q15043 492 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 KRT40Q6A162 431 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 TTC30AQ86WT1 665 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 VPS37DQ86XT2 251 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 CAPN10Q9HC96 672 aa13.43□□□□□ -0.26
SYNE2-207ENST00000458046 PHKA1P46020 1223 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 NUBP1P53384 320 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 ZNF215Q9UL58 517 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-207ENST00000458046 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 ATP1A3P13637 1013 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 SYKP43405 635 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 GSDMDP57764 484 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 MAP2K1Q02750 393 aaPredicted RBP13.42□□□□□ -0.26
SYNE2-207ENST00000458046 NCAPHQ15003 741 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
SYNE2-207ENST00000458046 SNAP23O00161 211 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-207ENST00000458046 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-207ENST00000458046 STARD3NLO95772 234 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 POU5F1BQ06416 359 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 TMEM164Q5U3C3 297 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 STK11IPQ8N1F8 1099 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 OSBPL5Q9H0X9 879 aaPredicted RBP13.41□□□□□ -0.26
SYNE2-207ENST00000458046 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
SYNE2-207ENST00000458046 PITPNM2Q9BZ72 1349 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 NPHP1O15259 732 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 APOA5Q6Q788 366 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 SHC4Q6S5L8 630 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 WDR75Q8IWA0 830 aaKnown RBP13.41□□□□□ -0.26
SYNE2-207ENST00000458046 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 ZMIZ1Q9ULJ6 1067 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
SYNE2-207ENST00000458046 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 PDE6AP16499 860 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 CTSWP56202 376 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 TPM4P67936 248 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 PNOCQ13519 176 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-207ENST00000458046 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 BPIFA3Q9BQP9 254 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 IMPACTQ9P2X3 320 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-207ENST00000458046 ZBTB43O43298 467 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 PDE8BO95263 885 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 NAT2P11245 290 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
SYNE2-207ENST00000458046 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
SYNE2-207ENST00000458046 SYCP1Q15431 976 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms