RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 BAZ2BQ9UIF8 2168 aaKnown RBP19.07■□□□□ 0.64
CCDC43-202ENST00000457422 EP400Q96L91 3159 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 KLRG2A4D1S0 409 aaPredicted RBP19.06■□□□□ 0.64
CCDC43-202ENST00000457422 PRR29P0C7W0 189 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
CCDC43-202ENST00000457422 TTC38Q5R3I4 469 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 PNMA1Q8ND90 353 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 SH3GLB2Q9NR46 395 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 KCND1Q9NSA2 647 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 SAP30BPQ9UHR5 308 aaKnown RBP19.06■□□□□ 0.64
CCDC43-202ENST00000457422 FOCADQ5VW36 1801 aa19.06■□□□□ 0.64
CCDC43-202ENST00000457422 GPR75-ASB3A0A0A6YYF3 556 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 RRP9O43818 475 aaKnown RBP19.05■□□□□ 0.64
CCDC43-202ENST00000457422 SKILP12757 684 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 BTDP43251 543 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-202ENST00000457422 MORC3Q14149 939 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 GRM4Q14833 912 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 SLC44A5Q8NCS7 719 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 CCDC150Q8NCX0 1101 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-202ENST00000457422 CCDC34Q96HJ3 373 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 MKNK2Q9HBH9 465 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 GNAQP50148 359 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 NLRP5P59047 1200 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 GRAMD1CQ8IYS0 662 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 PDILTQ8N807 584 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 MLKLQ8NB16 471 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
CCDC43-202ENST00000457422 DACH1Q9UI36 760 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 BRWD3Q6RI45 1802 aa19.05■□□□□ 0.64
CCDC43-202ENST00000457422 USP17L3A6NCW0 530 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 USP17L4A6NCW7 530 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 POLRMTO00411 1230 aaKnown RBP19.04■□□□□ 0.64
CCDC43-202ENST00000457422 CBFA2T2O43439 604 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TRIM37O94972 964 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 ATP1A3P13637 1013 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 VEGFAP15692 232 aaPredicted RBP19.04■□□□□ 0.64
CCDC43-202ENST00000457422 CALML3P27482 149 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 USP17L1Q7RTZ2 530 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 ZNF287Q9HBT7 754 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 POLLQ9UGP5 575 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TSPY3P0CV98 308 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TSPY8P0CW00 308 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 PLCG2P16885 1265 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 PLCD1P51178 756 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 ZNF174Q15697 407 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TMC6Q7Z403 805 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TMC4Q7Z404 712 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 SH3RF1Q7Z6J0 888 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TBC1D16Q8TBP0 767 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 TBC1D22AQ8WUA7 517 aa19.04■□□□□ 0.64
CCDC43-202ENST00000457422 MYH1P12882 1939 aa19.03■□□□□ 0.64
CCDC43-202ENST00000457422 ZNF444Q8N0Y2 327 aaPredicted RBP19.03■□□□□ 0.64
CCDC43-202ENST00000457422 MAD2L2Q9UI95 211 aa19.03■□□□□ 0.64
CCDC43-202ENST00000457422 GAKO14976 1311 aa19.03■□□□□ 0.64
CCDC43-202ENST00000457422 A0A087X0B3 334 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 ADAMTS3O15072 1205 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 SLFN14P0C7P3 912 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 RASA1P20936 1047 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 CT47A1Q5JQC4 288 aaPredicted RBP19.02■□□□□ 0.64
CCDC43-202ENST00000457422 SLF2Q8IX21 1173 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 FAM177A1Q8N128 213 aaPredicted RBP19.02■□□□□ 0.64
CCDC43-202ENST00000457422 STAG2Q8N3U4 1231 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 SYMPKQ92797 1274 aaKnown RBP19.02■□□□□ 0.64
CCDC43-202ENST00000457422 EPSTI1Q96J88 318 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 SNED1Q8TER0 1413 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 ANKRD31Q8N7Z5 1873 aa19.02■□□□□ 0.64
CCDC43-202ENST00000457422 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.63
CCDC43-202ENST00000457422 KCNJ6P48051 423 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 UBASH3AP57075 661 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 PTGDRQ13258 359 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 PIK3AP1Q6ZUJ8 805 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 C16orf86Q6ZW13 317 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 KRT27Q7Z3Y8 459 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 TEX11Q8IYF3 940 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 ENOX1Q8TC92 643 aaKnown RBP19.02■□□□□ 0.63
CCDC43-202ENST00000457422 C16orf45Q96MC5 204 aaPredicted RBP19.02■□□□□ 0.63
CCDC43-202ENST00000457422 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.63
CCDC43-202ENST00000457422 TPD52L1Q16890 204 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-202ENST00000457422 MFSD14BQ5SR56 506 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 ARMCX5Q6P1M9 558 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 GPKOWQ92917 476 aaPredicted RBP eCLIP19.01■□□□□ 0.63
CCDC43-202ENST00000457422 DHX58Q96C10 678 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 FANCLQ9NW38 375 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 NRXN2Q9P2S2 1712 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 RHBDL3P58872 404 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 LZTS2Q9BRK4 669 aa19.01■□□□□ 0.63
CCDC43-202ENST00000457422 FLT1P17948 1338 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 PALM3A6NDB9 673 aaPredicted RBP19■□□□□ 0.63
CCDC43-202ENST00000457422 C6orf229H3BNL8 230 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 SERPINC1P01008 464 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 TNNT1P13805 278 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 SFPQP23246 707 aaKnown RBP eCLIP19■□□□□ 0.63
CCDC43-202ENST00000457422 ZNF827Q17R98 1081 aa19■□□□□ 0.63
CCDC43-202ENST00000457422 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms