RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 LENG1Q96BZ8 264 aaPredicted RBP20.21■□□□□ 0.83
SF3B4-202ENST00000457312 FAM163AQ96GL9 167 aaPredicted RBP20.21■□□□□ 0.83
SF3B4-202ENST00000457312 CERS4Q9HA82 394 aa20.21■□□□□ 0.83
SF3B4-202ENST00000457312 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
SF3B4-202ENST00000457312 ADAMTS4O75173 837 aa20.2■□□□□ 0.82
SF3B4-202ENST00000457312 FGBP02675 491 aa20.2■□□□□ 0.82
SF3B4-202ENST00000457312 ACLYP53396 1101 aa20.2■□□□□ 0.82
SF3B4-202ENST00000457312 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L2Q6R6M4 530 aa20.2■□□□□ 0.82
SF3B4-202ENST00000457312 DZIP1Q86YF9 867 aaKnown RBP20.2■□□□□ 0.82
SF3B4-202ENST00000457312 TSR2Q969E8 191 aaKnown RBP20.2■□□□□ 0.82
SF3B4-202ENST00000457312 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
SF3B4-202ENST00000457312 GFRA3O60609 400 aa20.19■□□□□ 0.82
SF3B4-202ENST00000457312 KLHDC4Q8TBB5 520 aa20.19■□□□□ 0.82
SF3B4-202ENST00000457312 NUP133Q8WUM0 1156 aa20.19■□□□□ 0.82
SF3B4-202ENST00000457312 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
SF3B4-202ENST00000457312 TSEN34Q9BSV6 310 aaKnown RBP20.19■□□□□ 0.82
SF3B4-202ENST00000457312 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
SF3B4-202ENST00000457312 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 SPDYE16A6NNV3 312 aaPredicted RBP20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 CA3P07451 260 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 CYP2C18P33260 490 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 SAMD1Q6SPF0 538 aaPredicted RBP20.18■□□□□ 0.82
SF3B4-202ENST00000457312 LPIN2Q92539 896 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 DNAJC18Q9H819 358 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
SF3B4-202ENST00000457312 GPR75-ASB3A0A0A6YYF3 556 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 GDF11O95390 407 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 IL9P15248 144 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 CDK7P50613 346 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 RABL6Q3YEC7 729 aaPredicted RBP20.17■□□□□ 0.82
SF3B4-202ENST00000457312 MAML3Q96JK9 1138 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 SLC4A7Q9Y6M7 1214 aa20.17■□□□□ 0.82
SF3B4-202ENST00000457312 STRNO43815 780 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 PTPN5P54829 565 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 CATSPERGQ6ZRH7 1159 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 MOV10L1Q9BXT6 1211 aaKnown RBP20.16■□□□□ 0.82
SF3B4-202ENST00000457312 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
SF3B4-202ENST00000457312 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 DENND2AQ9ULE3 1009 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 MYO15AQ9UKN7 3530 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 FOCADQ5VW36 1801 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 PLXNA3P51805 1871 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 KMT2EQ8IZD2 1858 aa20.16■□□□□ 0.82
SF3B4-202ENST00000457312 KMT2BQ9UMN6 2715 aaPredicted RBP20.15■□□□□ 0.82
SF3B4-202ENST00000457312 MOXD2PA6NHM9 499 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 GRB10Q13322 594 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 ERMP1Q7Z2K6 904 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 FAM126BQ8IXS8 530 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 ZGPATQ8N5A5 531 aaKnown RBP20.15■□□□□ 0.82
SF3B4-202ENST00000457312 ANKRD44Q8N8A2 993 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 UBE2ZQ9H832 354 aaPredicted RBP20.15■□□□□ 0.82
SF3B4-202ENST00000457312 ADAMTS8Q9UP79 889 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 SYNRGQ9UMZ2 1314 aa20.15■□□□□ 0.82
SF3B4-202ENST00000457312 SEMA3EO15041 775 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 LPXNO60711 386 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 ARHGEF15O94989 841 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 ATP2A2P16615 1042 aaKnown RBP20.14■□□□□ 0.81
SF3B4-202ENST00000457312 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
SF3B4-202ENST00000457312 ZYXQ15942 572 aaKnown RBP20.14■□□□□ 0.81
SF3B4-202ENST00000457312 LEXMQ3ZCV2 418 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 CCSAPQ6IQ19 270 aaPredicted RBP20.14■□□□□ 0.81
SF3B4-202ENST00000457312 ZNF384Q8TF68 577 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 ARNTL2Q8WYA1 636 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 MFSD14AQ96MC6 490 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 GINM1Q9NU53 330 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
SF3B4-202ENST00000457312 SLC5A4Q9NY91 659 aa20.14■□□□□ 0.81
SF3B4-202ENST00000457312 BAHCC1Q9P281 2608 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 ELP1O95163 1332 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 UMODL1Q5DID0 1318 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
SF3B4-202ENST00000457312 VCAM1P19320 739 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 PHKA1P46020 1223 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 TMEM67Q5HYA8 995 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 KLHDC9Q8NEP7 349 aa20.13■□□□□ 0.81
SF3B4-202ENST00000457312 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.13■□□□□ 0.81
SF3B4-202ENST00000457312 TPRP12270 2363 aaKnown RBP20.13■□□□□ 0.81
SF3B4-202ENST00000457312 NBPF7P0C2Y1 421 aaPredicted RBP20.12■□□□□ 0.81
SF3B4-202ENST00000457312 AKR1A1P14550 325 aa20.12■□□□□ 0.81
SF3B4-202ENST00000457312 ERCC3P19447 782 aa20.12■□□□□ 0.81
SF3B4-202ENST00000457312 KCNA10Q16322 511 aa20.12■□□□□ 0.81
SF3B4-202ENST00000457312 PI4KBQ9UBF8 816 aa20.12■□□□□ 0.81
SF3B4-202ENST00000457312 MYADML2A6NDP7 307 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 APAF1O14727 1248 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 ALDH1L1O75891 902 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 TAP1Q03518 808 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 TCF15Q12870 199 aa20.11■□□□□ 0.81
SF3B4-202ENST00000457312 SHCBP1Q8NEM2 672 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms