RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CFAP100Q494V2 611 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 IQUBQ8NA54 791 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 TGFBRAP1Q8WUH2 860 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
TOP3B-213ENST00000457179 TSPY2A6NKD2 308 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 SERPINC1P01008 464 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 TUBB4AP04350 444 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 LDHBP07195 334 aaKnown RBP15.4■□□□□ 0.06
TOP3B-213ENST00000457179 PFKFB1P16118 471 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 RTN1Q16799 776 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 PDILTQ8N807 584 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 MXD3Q9BW11 206 aa15.4■□□□□ 0.06
TOP3B-213ENST00000457179 MROH7-TTC4A0A0A0MT08 1334 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 VWA3AA6NCI4 1184 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 BTBD18B2RXH4 712 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 GPSM2P81274 684 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 FANCCQ00597 558 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 PICALMQ13492 652 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 DOK7Q18PE1 504 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 PROM2Q8N271 834 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 STX8Q9UNK0 236 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 CLGNO14967 610 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 ESR2Q92731 530 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 KRT23Q9C075 422 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 PPP2R2CQ9Y2T4 447 aa15.39■□□□□ 0.05
TOP3B-213ENST00000457179 AKAP17AQ02040 695 aaKnown RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 NR5A1Q13285 461 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 IFIT1BQ5T764 474 aaKnown RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 DPF2Q92785 391 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 CORO7P57737 925 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 DDR1Q08345 913 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 SSRP1Q08945 709 aaKnown RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 GRAPQ13588 217 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 SLC10A5Q5PT55 438 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
TOP3B-213ENST00000457179 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
TOP3B-213ENST00000457179 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 GNAT2P19087 354 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 TXLNAP40222 546 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 GTF2IP78347 998 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CCDC91Q7Z6B0 441 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 DESI2Q9BSY9 194 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 VPS54Q9P1Q0 977 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 MRFAP1Q9Y605 127 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 ZMYM6O95789 1325 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 COL1A1P02452 1464 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 UBASH3AP57075 661 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 MAP3K9P80192 1104 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 JAKMIP3Q5VZ66 844 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 RSRC2Q7L4I2 434 aaKnown RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 TRIM22Q8IYM9 498 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 ZNF654Q8IZM8 581 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 TMEM87BQ96K49 555 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CXorf56Q9H5V9 222 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CNNM2Q9H8M5 875 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 V9GY48 417 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CCDC151A5D8V7 595 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 PNOCQ13519 176 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 MFSD14BQ5SR56 506 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 LRRC31Q6UY01 552 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 IRX2Q9BZI1 471 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 CPVLQ9H3G5 476 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 DCP1AQ9NPI6 582 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
TOP3B-213ENST00000457179 COL22A1Q8NFW1 1626 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-213ENST00000457179 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 RHOXF2BP0C7M4 288 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 CCDC172P0C7W6 258 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 SLURP2P0DP57 97 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 SYKP43405 635 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 MNAT1P51948 309 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 MCTP2Q6DN12 878 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 RHOXF2Q9BQY4 288 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 EIF3JO75822 258 aaKnown RBP15.36■□□□□ 0.05
TOP3B-213ENST00000457179 TOP1P11387 765 aaKnown RBP15.36■□□□□ 0.05
TOP3B-213ENST00000457179 KCNJ6P48051 423 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 SCNN1DP51172 638 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 CEP83Q9Y592 693 aa15.36■□□□□ 0.05
TOP3B-213ENST00000457179 PLEKHA8P1O95397 391 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 YEATS4O95619 227 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
TOP3B-213ENST00000457179 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 AXDND1Q5T1B0 1012 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-213ENST00000457179 RASGRP2Q7LDG7 609 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 HDXQ7Z353 690 aa15.35■□□□□ 0.05
TOP3B-213ENST00000457179 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms