RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 IRF6O14896 467 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 SPRYD7Q5W111 196 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 PNMA1Q8ND90 353 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
LINC00887-204ENST00000456816 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 C19orf81C9J6K1 198 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 ZBTB48P10074 688 aaPredicted RBP16.54■□□□□ 0.24
LINC00887-204ENST00000456816 HSPA6P17066 643 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 LIFRP42702 1097 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 HMGCS2P54868 508 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 BACE1P56817 501 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 APOBRQ0VD83 1088 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 SIAH1Q8IUQ4 282 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 HHIPL1Q96JK4 782 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 KIAA1683Q9H0B3 1180 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
LINC00887-204ENST00000456816 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
LINC00887-204ENST00000456816 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 CXCL11O14625 94 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 SLC10A3P09131 477 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 GJA5P36382 358 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 GTF2A2P52657 109 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 AK2P54819 239 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 SLFN13Q68D06 897 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 MKL1Q969V6 931 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
LINC00887-204ENST00000456816 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 SYNPO2Q9UMS6 1093 aa16.53■□□□□ 0.24
LINC00887-204ENST00000456816 F5H6K3 240 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 CETPP11597 493 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 NOVP48745 357 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 KLRC3Q07444 240 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 TOB2Q14106 344 aaPredicted RBP16.52■□□□□ 0.24
LINC00887-204ENST00000456816 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 MYL10Q9BUA6 226 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
LINC00887-204ENST00000456816 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 ZBTB43O43298 467 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 DDAH1O94760 285 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 NDUFB10O96000 172 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CALM1P0DP23 149 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CALM2P0DP24 149 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CALM3P0DP25 149 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 SLC1A4P43007 532 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 HTRA3P83110 453 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
LINC00887-204ENST00000456816 FASTKD5Q7L8L6 764 aaKnown RBP16.51■□□□□ 0.23
LINC00887-204ENST00000456816 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
LINC00887-204ENST00000456816 LPAR1Q92633 364 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 TANGO6Q9C0B7 1094 aa16.51■□□□□ 0.23
LINC00887-204ENST00000456816 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
LINC00887-204ENST00000456816 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
LINC00887-204ENST00000456816 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
LINC00887-204ENST00000456816 RXRAP19793 462 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 DGKZQ13574 1117 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 CCL15Q16663 113 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
LINC00887-204ENST00000456816 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
LINC00887-204ENST00000456816 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
LINC00887-204ENST00000456816 AGXT2Q9BYV1 514 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
LINC00887-204ENST00000456816 FRMPD2Q68DX3 1309 aaPredicted RBP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 MANSC4A6NHS7 340 aaPredicted RBP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 BMP3P12645 472 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 VCAM1P19320 739 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 KIF5BP33176 963 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 STK3Q13188 491 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 SH3D19Q5HYK7 790 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
LINC00887-204ENST00000456816 PROCA1Q8NCQ7 364 aaPredicted RBP16.49■□□□□ 0.23
LINC00887-204ENST00000456816 GMCL1Q96IK5 515 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms