RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MCAMP43121 646 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 PSEN1P49768 467 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 COPB1P53618 953 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 GNGT1P63211 74 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 EZH2Q15910 746 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 CT47A1Q5JQC4 288 aaPredicted RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 PAPD7Q5XG87 772 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 HDAC7Q8WUI4 952 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 POLD4Q9HCU8 107 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 GNL3LQ9NVN8 582 aaKnown RBP11.61□□□□□ -0.55
CLIP4-208ENST00000456385 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 DUSP10Q9Y6W6 482 aa11.61□□□□□ -0.55
CLIP4-208ENST00000456385 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 LRRC10BA6NIK2 292 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 SEMA3EO15041 775 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 EIF3HO15372 352 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLIP4-208ENST00000456385 CIAO1O76071 339 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 IFNAR1P17181 557 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 INPP5BP32019 993 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 MMP14P50281 582 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 UBXN1Q04323 297 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 CAGE1Q8TC20 777 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 LIMA1Q9UHB6 759 aaKnown RBP11.6□□□□□ -0.55
CLIP4-208ENST00000456385 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 MYO1FO00160 1098 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
CLIP4-208ENST00000456385 PHKG2P15735 406 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 ADD2P35612 726 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 MAP2K2P36507 400 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 TCP11X2Q5H9J9 407 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 RRAGBQ5VZM2 374 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 WDR59Q6PJI9 974 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 ANKRD20A12PQ8NF67 263 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 GSDMAQ96QA5 445 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 LACRTQ9GZZ8 138 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 VPS54Q9P1Q0 977 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 ARFGEF2Q9Y6D5 1785 aa11.6□□□□□ -0.55
CLIP4-208ENST00000456385 KCNJ18B7U540 433 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 PPARAQ07869 468 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 KCNJ12Q14500 433 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 SND1Q7KZF4 910 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 AIDAQ96BJ3 306 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 JADE2Q9NQC1 790 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 TMEM94Q12767 1356 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 AENQ8WTP8 325 aaKnown RBP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 WASF1Q92558 559 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 ARL8AQ96BM9 186 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 AATFQ9NY61 560 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 DMGDHQ9UI17 866 aaKnown RBP11.59□□□□□ -0.55
CLIP4-208ENST00000456385 CAPN7Q9Y6W3 813 aa11.59□□□□□ -0.55
CLIP4-208ENST00000456385 ZNF532Q9HCE3 1301 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 PES1O00541 588 aaKnown RBP11.58□□□□□ -0.56
CLIP4-208ENST00000456385 LIFRP42702 1097 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 SLC7A5Q01650 507 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 PDCLQ13371 301 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-208ENST00000456385 OR8K1Q8NGG5 319 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 SH3GL2Q99962 352 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.58□□□□□ -0.56
CLIP4-208ENST00000456385 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
CLIP4-208ENST00000456385 FAM184BQ9ULE4 1060 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 CEP131Q9UPN4 1083 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 XDHP47989 1333 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 MACROD2A1Z1Q3 448 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 RTN1Q16799 776 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 TTMPQ5BVD1 217 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 KIAA1328Q86T90 577 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 NUP133Q8WUM0 1156 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 NELFBQ8WX92 580 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 MTRQ99707 1265 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 JPH2Q9BR39 696 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-208ENST00000456385 LRRC1Q9BTT6 524 aa11.58□□□□□ -0.56
CLIP4-208ENST00000456385 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
CLIP4-208ENST00000456385 TRIM49BA6NDI0 452 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 TRIM75PA6NK02 468 aa11.57□□□□□ -0.56
CLIP4-208ENST00000456385 NDUFAB1O14561 156 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms