RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	TNFAIP3	P21580	790 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SERPINB6	P35237	376 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CORO7	P57737	925 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SFMBT2	Q5VUG0	894 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	LMBR1L	Q6UX01	489 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	UBL4B	Q8N7F7	174 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ZNF711	Q9Y462	761 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TADA3	O75528	432 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	DYNC1I2	Q13409	638 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	KRT79	Q5XKE5	535 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PDCD7	Q8N8D1	485 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	AOX1	Q06278	1338 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	DNAJC8	O75937	253 aa	Predicted RBP	13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TBC1D8	O95759	1140 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ZNF287	Q9HBT7	754 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ATP8A1	Q9Y2Q0	1164 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SLC4A7	Q9Y6M7	1214 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173		B4E1Z4	1266 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173		I3L4J1	428 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	IKBKB	O14920	756 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SLC5A1	P13866	664 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SPATA1	Q5VX52	437 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	FERMT2	Q96AC1	680 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ZBTB10	Q96DT7	871 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	DONSON	Q9NYP3	566 aa		13.63	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PPP1R12A	O14974	1030 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PLCD1	P51178	756 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SARM1	Q6SZW1	724 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CTTNBP2NL	Q9P2B4	639 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	MAP3K7	O43318	606 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	FLOT1	O75955	427 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ZNF449	Q6P9G9	518 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	EPSTI1	Q96J88	318 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173		Q9H521	79 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	VPS37B	Q9H9H4	285 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CD248	Q9HCU0	757 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	MYO1F	O00160	1098 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SRGAP2	O75044	1071 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SLCO1A2	P46721	670 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	NFU1	Q9UMS0	254 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TXNDC16	Q9P2K2	825 aa		13.62	□□□□□ -0.23
NEDD4L-208	ENST00000456173	MEFV	O15553	781 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	LARGE1	O95461	756 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	MSH2	P43246	934 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PIK3AP1	Q6ZUJ8	805 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	RASSF10	A6NK89	507 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ALDH1L1	O75891	902 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	NAPA	P54920	295 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CCDC92	Q53HC0	331 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CAPN12	Q6ZSI9	719 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SV2B	Q7L1I2	683 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CCDC84	Q86UT8	332 aa	Predicted RBP	13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TMEM87A	Q8NBN3	555 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	IL17RA	Q96F46	866 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	HAUS2	Q9NVX0	235 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TRPA1	O75762	1119 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	RNF8	O76064	485 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	IRX4	P78413	519 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	RASSF7	Q02833	373 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CLEC17A	Q6ZS10	378 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CENPK	Q9BS16	269 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CALML3	P27482	149 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PDE4B	Q07343	736 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	NLRP14	Q86W24	1093 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	UNC5CL	Q8IV45	518 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TRMT2A	Q8IZ69	625 aa	Known RBP	13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	COMMD10	Q9Y6G5	202 aa		13.61	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PRAG1	Q86YV5	1406 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ATP10B	O94823	1461 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	DHX9	Q08211	1270 aa	Known RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CAVIN4	Q5BKX8	364 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SMC1B	Q8NDV3	1235 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	FGD4	Q96M96	766 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SAMSN1	Q9NSI8	373 aa	Known RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PPIP5K1	Q6PFW1	1433 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	EVI5	O60447	810 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CEBPA	P49715	358 aa	Predicted RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	CNNM4	Q6P4Q7	775 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	KIRREL3	Q8IZU9	778 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SYCE1	Q8N0S2	351 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	KIF9	Q9HAQ2	790 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	POLD4	Q9HCU8	107 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	SSH2	Q76I76	1423 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	TTC36	A6NLP5	189 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	FOXO3	O43524	673 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PLA2G4A	P47712	749 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	VSNL1	P62760	191 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	HS2ST1	Q7LGA3	356 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PARP2	Q9UGN5	583 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	AMFR	Q9UKV5	643 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ARL1	P40616	181 aa	Predicted RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	COPB1	P53618	953 aa	Known RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	KSR2	Q6VAB6	950 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ANKRD13D	Q6ZTN6	518 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	PIP4K2C	Q8TBX8	421 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	LRRC8C	Q8TDW0	803 aa		13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.6	□□□□□ -0.23
NEDD4L-208	ENST00000456173	ANGEL1	Q9UNK9	670 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms