RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FBXL16Q8N461 479 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 BRI3BPQ8WY22 251 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
HMGXB4-204ENST00000455359 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 IFIT3O14879 490 aaKnown RBP16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 PRC1O43663 620 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 AOC2O75106 756 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 ANTXR2P58335 489 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 MAP2K1Q02750 393 aaPredicted RBP16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 ADCK5Q3MIX3 580 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 RCSD1Q6JBY9 416 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 CLEC10AQ8IUN9 316 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 NKX2-3Q8TAU0 364 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
HMGXB4-204ENST00000455359 F5H6K3 240 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 HOXA7P31268 230 aaPredicted RBP16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 LIFRP42702 1097 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 KLRC3Q07444 240 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 SEC23AQ15436 765 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 IFIT1BQ5T764 474 aaKnown RBP16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 IGDCC4Q8TDY8 1250 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 KAT14Q9H8E8 782 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 PNMA3Q9UL41 463 aa16.79■□□□□ 0.28
HMGXB4-204ENST00000455359 BTBD19C9JJ37 291 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 CA12O43570 354 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 RPS6KB1P23443 525 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 WTAPQ15007 396 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 GADL1Q6ZQY3 521 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 ZIC5Q96T25 663 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 PTPN18Q99952 460 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 ZKSCAN3Q9BRR0 538 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 NDUFB10O96000 172 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 VCAM1P19320 739 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 SLFN13Q68D06 897 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 GPAT2Q6NUI2 795 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 SAGE1Q9NXZ1 904 aa16.77■□□□□ 0.28
HMGXB4-204ENST00000455359 GREB1LQ9C091 1923 aaPredicted RBP16.77■□□□□ 0.27
HMGXB4-204ENST00000455359 PDHXO00330 501 aa16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 OSBPP22059 807 aa16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 ZYXQ15942 572 aaKnown RBP16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 SGMS1Q86VZ5 419 aa16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
HMGXB4-204ENST00000455359 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 SLC1A4P43007 532 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 FGD1P98174 961 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 CATSPERGQ6ZRH7 1159 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 CATIPQ7Z7H3 387 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 BEGAINQ9BUH8 593 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 AGXT2Q9BYV1 514 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 MYPNQ86TC9 1320 aa16.75■□□□□ 0.27
HMGXB4-204ENST00000455359 PLA2G6O60733 806 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 CALM1P0DP23 149 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 CALM2P0DP24 149 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 CALM3P0DP25 149 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 BMP3P12645 472 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 RCAN1P53805 252 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 GPATCH4Q5T3I0 446 aaKnown RBP16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 SPICE1Q8N0Z3 855 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
HMGXB4-204ENST00000455359 RPAP3Q9H6T3 665 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms