RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
LINC00963-208ENST00000454968 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
LINC00963-208ENST00000454968 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
LINC00963-208ENST00000454968 CLEC11AQ9Y240 323 aa19.44■□□□□ 0.7
LINC00963-208ENST00000454968 PALM3A6NDB9 673 aaPredicted RBP19.43■□□□□ 0.7
LINC00963-208ENST00000454968 ITGBL1O95965 494 aaPredicted RBP19.43■□□□□ 0.7
LINC00963-208ENST00000454968 PDHBP11177 359 aa19.43■□□□□ 0.7
LINC00963-208ENST00000454968 IFNAR1P17181 557 aa19.43■□□□□ 0.7
LINC00963-208ENST00000454968 RXRAP19793 462 aa19.43■□□□□ 0.7
LINC00963-208ENST00000454968 NF2P35240 595 aa19.43■□□□□ 0.7
LINC00963-208ENST00000454968 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
LINC00963-208ENST00000454968 RAB3GAP1Q15042 981 aa19.43■□□□□ 0.7
LINC00963-208ENST00000454968 CWC22Q9HCG8 908 aaKnown RBP19.43■□□□□ 0.7
LINC00963-208ENST00000454968 SMARCA1P28370 1054 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 MAP3K9P80192 1104 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 LDLRAD1Q5T700 205 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 CHADLQ6NUI6 762 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 LRRC47Q8N1G4 583 aaKnown RBP19.42■□□□□ 0.7
LINC00963-208ENST00000454968 ZKSCAN4Q969J2 545 aaPredicted RBP19.42■□□□□ 0.7
LINC00963-208ENST00000454968 ARHGEF10LQ9HCE6 1279 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 MAD2L2Q9UI95 211 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 SNCAIPQ9Y6H5 919 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 KIF3CO14782 793 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 PTPRAP18433 802 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 KIF5BP33176 963 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 FKBP1BP68106 108 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 TMTC3Q6ZXV5 915 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 NBPF11Q86T75 865 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 RAB11FIP4Q86YS3 637 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 ZNF526Q8TF50 670 aaPredicted RBP19.42■□□□□ 0.7
LINC00963-208ENST00000454968 GMCL1Q96IK5 515 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 KIAA1683Q9H0B3 1180 aa19.42■□□□□ 0.7
LINC00963-208ENST00000454968 DAXXQ9UER7 740 aaPredicted RBP19.42■□□□□ 0.7
LINC00963-208ENST00000454968 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 F5H6K3 240 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 TRAF5O00463 557 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 ECE1P42892 770 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 IREB2P48200 963 aaKnown RBP19.41■□□□□ 0.7
LINC00963-208ENST00000454968 KLRC3Q07444 240 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 VGLL4Q14135 290 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 CTCFLQ8NI51 663 aaPredicted RBP19.41■□□□□ 0.7
LINC00963-208ENST00000454968 NUP133Q8WUM0 1156 aa19.41■□□□□ 0.7
LINC00963-208ENST00000454968 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.41■□□□□ 0.7
LINC00963-208ENST00000454968 BAZ2BQ9UIF8 2168 aaKnown RBP19.41■□□□□ 0.7
LINC00963-208ENST00000454968 PARP14Q460N5 1801 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 JAK2O60674 1132 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
LINC00963-208ENST00000454968 GNAQP50148 359 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 HMGN5P82970 282 aaKnown RBP19.4■□□□□ 0.7
LINC00963-208ENST00000454968 ZNF543Q08ER8 600 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 ASPRV1Q53RT3 343 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 ANKRD13AQ8IZ07 590 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 DCAF4Q8WV16 495 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 SH2D4AQ9H788 454 aa19.4■□□□□ 0.7
LINC00963-208ENST00000454968 GPBP1L1Q9HC44 474 aaPredicted RBP19.4■□□□□ 0.7
LINC00963-208ENST00000454968 NAP1L2Q9ULW6 460 aaPredicted RBP19.4■□□□□ 0.7
LINC00963-208ENST00000454968 LOC285556D6RIA3 1793 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 CDKL5O76039 1030 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 NDUFB10O96000 172 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 HSP90AA1P07900 732 aaKnown RBP19.39■□□□□ 0.69
LINC00963-208ENST00000454968 SLC35G1Q2M3R5 365 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.69
LINC00963-208ENST00000454968 CPLX2Q6PUV4 134 aaKnown RBP19.39■□□□□ 0.69
LINC00963-208ENST00000454968 CCDC144CPQ8IYA2 1237 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 STAG2Q8N3U4 1231 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 SRBD1Q8N5C6 995 aaKnown RBP19.39■□□□□ 0.69
LINC00963-208ENST00000454968 LZTS2Q9BRK4 669 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 VCPKMTQ9H867 229 aa19.39■□□□□ 0.69
LINC00963-208ENST00000454968 CNTNAP5Q8WYK1 1306 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 PLEKHA8P1O95397 391 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 PARP1P09874 1014 aaKnown RBP19.38■□□□□ 0.69
LINC00963-208ENST00000454968 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 C12orf42Q96LP6 360 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 SPZ1Q9BXG8 430 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 RNF26Q9BY78 433 aaPredicted RBP19.38■□□□□ 0.69
LINC00963-208ENST00000454968 PICK1Q9NRD5 415 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 CIZ1Q9ULV3 898 aaPredicted RBP19.38■□□□□ 0.69
LINC00963-208ENST00000454968 SMC3Q9UQE7 1217 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 AFG3L2Q9Y4W6 797 aa19.38■□□□□ 0.69
LINC00963-208ENST00000454968 RLFQ13129 1914 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 CPLX1O14810 134 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 CYTH3O43739 400 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 FMNL1O95466 1100 aaPredicted RBP19.37■□□□□ 0.69
LINC00963-208ENST00000454968 GJB2P29033 226 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.69
LINC00963-208ENST00000454968 KIAA1755Q5JYT7 1200 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 SLFN13Q68D06 897 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 CCDC84Q86UT8 332 aaPredicted RBP19.37■□□□□ 0.69
LINC00963-208ENST00000454968 ZNF280CQ8ND82 737 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 LPAR1Q92633 364 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 AS3MTQ9HBK9 375 aa19.37■□□□□ 0.69
LINC00963-208ENST00000454968 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms