RNA–Protein interactions for RNA: ENST00000454520.6

RACGAP1-203, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-203ENST00000454520 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 LRRC2Q9BYS8 371 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 ARHGAP39Q9C0H5 1083 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 FBXO28Q9NVF7 368 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 MTMR4Q9NYA4 1195 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 TTLL1O95922 423 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 FAM83BQ5T0W9 1011 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 IQCA1Q86XH1 822 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 CPXCR1Q8N123 301 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 UBAC1Q9BSL1 405 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 NBPF3Q9H094 633 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 IL17RBQ9NRM6 502 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 ZSWIM5Q9P217 1185 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 OTOFQ9HC10 1997 aa7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 MKI67P46013 3256 aaKnown RBP7.56□□□□□ -1.2
RACGAP1-203ENST00000454520 FKTNO75072 461 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 SLC1A4P43007 532 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 FGD1P98174 961 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 PABPC4Q13310 644 aaKnown RBP eCLIP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 MOGSQ13724 837 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 KCTD1Q719H9 257 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 ANKRD23Q86SG2 305 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 NEDD1Q8NHV4 660 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 GOPCQ9HD26 462 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 PNMA3Q9UL41 463 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 NAV1Q8NEY1 1877 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 DHX16O60231 1041 aaKnown RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 PSMC4P43686 418 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 SNAP25P60880 206 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 KIF22Q14807 665 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 RAB11FIP4Q86YS3 637 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 MAP4K1Q92918 833 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 LSG1Q9H089 658 aaKnown RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 KIAA1683Q9H0B3 1180 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 TMX2Q9Y320 296 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 RAD50Q92878 1312 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 COL2A1P02458 1487 aaPredicted RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 TESPA1A2RU30 521 aaPredicted RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 E7EWF7 191 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 IFIT3O14879 490 aaKnown RBP7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 GOLGA8HP0CJ92 632 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 SLFN13Q68D06 897 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 TNS4Q8IZW8 715 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 STAG1Q8WVM7 1258 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 PIBF1Q8WXW3 757 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 VCPKMTQ9H867 229 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 GPCPD1Q9NPB8 672 aa7.55□□□□□ -1.2
RACGAP1-203ENST00000454520 FRMPD2Q68DX3 1309 aaPredicted RBP7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 ERICH2A1L162 156 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L15C9J2P7 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L13C9JLJ4 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 TMEM232C9JQI7 657 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L11C9JVI0 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L18D6R9N7 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L22D6RA61 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 NDUFB10O96000 172 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 CPA1P15085 419 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 SLC16A2P36021 539 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 HERVK_113P62684 666 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 CREB3L3Q68CJ9 461 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 TICAM2Q86XR7 235 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 CPVLQ9H3G5 476 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 VAT1LQ9HCJ6 419 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 BIN2Q9UBW5 565 aaPredicted RBP7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 HTTP42858 3142 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 BAZ2BQ9UIF8 2168 aaKnown RBP7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 SLC27A2O14975 620 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 ZKSCAN1P17029 563 aaPredicted RBP7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 COG2Q14746 738 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 Q3C1V9 767 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 NFXL1Q6ZNB6 911 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 NCOA7Q8NI08 942 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 NUP133Q8WUM0 1156 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 KRT23Q9C075 422 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 TXNRD2Q9NNW7 524 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 GINM1Q9NU53 330 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 SAGE1Q9NXZ1 904 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 SIPA1L1O43166 1804 aa7.54□□□□□ -1.2
RACGAP1-203ENST00000454520 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 ORC4O43929 436 aa7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 REC8O95072 547 aa7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 IFIT1BQ5T764 474 aaKnown RBP7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 STOX1Q6ZVD7 989 aa7.53□□□□□ -1.2
RACGAP1-203ENST00000454520 CYB5R4Q7L1T6 521 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms