RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-213ENST00000454468 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-213ENST00000454468 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 SLURP2P0DP57 97 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 TNNI2P48788 182 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 TEX35Q5T0J7 233 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 ATP8A2Q9NTI2 1148 aa13.58□□□□□ -0.24
SMPD4-213ENST00000454468 TXKP42681 527 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 ENOX2Q16206 610 aaKnown RBP13.57□□□□□ -0.24
SMPD4-213ENST00000454468 KANK3Q6NY19 840 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-213ENST00000454468 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-213ENST00000454468 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 GSTO1P78417 241 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 GPSM2P81274 684 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 TROAPQ12815 778 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 BLIDQ8IZY5 108 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 BRIP1Q9BX63 1249 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
SMPD4-213ENST00000454468 SARM1Q6SZW1 724 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 TRIM47Q96LD4 638 aa13.57□□□□□ -0.24
SMPD4-213ENST00000454468 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 UBXN4Q92575 508 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 CCZ1BP86790 482 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 SEC23AQ15436 765 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 TCP11L1Q9NUJ3 509 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 PPP1R1BQ9UD71 204 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 FAM170AA1A519 330 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 TEX33O43247 280 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 SLC16A2P36021 539 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 GRAPQ13588 217 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 ERCC6LQ2NKX8 1250 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 KIAA0825Q8IV33 1275 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 MLKLQ8NB16 471 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
SMPD4-213ENST00000454468 TTF2Q9UNY4 1162 aaKnown RBP13.56□□□□□ -0.24
SMPD4-213ENST00000454468 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 ASIC1P78348 528 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 COA7Q96BR5 231 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 PPP1R13BQ96KQ4 1090 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 XDHP47989 1333 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 TECP42680 631 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 TERF1P54274 439 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 PKN1Q16512 942 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 MTERF4Q7Z6M4 381 aaKnown RBP13.55□□□□□ -0.24
SMPD4-213ENST00000454468 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
SMPD4-213ENST00000454468 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 CALML3P27482 149 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 CUL4BQ13620 913 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
SMPD4-213ENST00000454468 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 CD209Q9NNX6 404 aa13.55□□□□□ -0.24
SMPD4-213ENST00000454468 SIPA1L3O60292 1781 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-213ENST00000454468 NCAPHQ15003 741 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-213ENST00000454468 FBXL16Q8N461 479 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
SMPD4-213ENST00000454468 TMEM47Q9BQJ4 181 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 A0A087X0B3 334 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 BMP6P22004 513 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 CASQ1P31415 396 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 PIGSQ96S52 555 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
SMPD4-213ENST00000454468 ZSCAN12O43309 604 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 SLU7O95391 586 aaKnown RBP13.53□□□□□ -0.24
SMPD4-213ENST00000454468 CDC25BP30305 580 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 UBXN1Q04323 297 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 ZNF771Q7L3S4 317 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-213ENST00000454468 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
SMPD4-213ENST00000454468 CARD6Q9BX69 1037 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 DDAH1O94760 285 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 DNA2P51530 1060 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 STIM1Q13586 685 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 MTF1Q14872 753 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 KIF4BQ2VIQ3 1234 aa13.53□□□□□ -0.24
SMPD4-213ENST00000454468 E4F1Q66K89 784 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms