RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 GIMAP6Q6P9H5 292 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 PLEKHH3Q7Z736 793 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 SOCS4Q8WXH5 440 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 TRIB2Q92519 343 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 GCC1Q96CN9 775 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 CWC22Q9HCG8 908 aaKnown RBP19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 TMX2Q9Y320 296 aa19.7■□□□□ 0.74
NCKIPSD-208ENST00000454134 EEF2P13639 858 aaKnown RBP19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 TDO2P48775 406 aa19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 COG2Q14746 738 aa19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 WDR78Q5VTH9 848 aa19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 LBX2Q6XYB7 198 aa19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 PAK6Q9NQU5 681 aaPredicted RBP19.69■□□□□ 0.74
NCKIPSD-208ENST00000454134 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 GNAT2P19087 354 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 RASA1P20936 1047 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 CCNA1P78396 465 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 ZMYM1Q5SVZ6 1142 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 MORN1Q5T089 497 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 SAMD1Q6SPF0 538 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 USP6NLQ92738 828 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 SH2D4AQ9H788 454 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 VCPKMTQ9H867 229 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 KANSL2Q9H9L4 492 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
NCKIPSD-208ENST00000454134 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 XRCC5P13010 732 aaKnown RBP19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 PDE1AP54750 535 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 CCL14Q16627 93 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 UBE2Q1Q7Z7E8 422 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 IFNL3Q8IZI9 196 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 EXOC6Q8TAG9 804 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 LPAR1Q92633 364 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 LNPKQ9C0E8 428 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 STAP2Q9UGK3 403 aa19.67■□□□□ 0.74
NCKIPSD-208ENST00000454134 FLOT1O75955 427 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 FARP2O94887 1054 aaPredicted RBP19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 RGS2P41220 211 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 CCDC129Q6ZRS4 1044 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 HMX1Q9NP08 348 aaPredicted RBP19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 HOXC10Q9NYD6 342 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 RLFQ13129 1914 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 ROBO3Q96MS0 1386 aa19.66■□□□□ 0.74
NCKIPSD-208ENST00000454134 RAD21O60216 631 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 PRDM1O75626 825 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 MAP2K5Q13163 448 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 ATG4CQ96DT6 458 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 RPTORQ8N122 1335 aa19.65■□□□□ 0.74
NCKIPSD-208ENST00000454134 WDR46O15213 610 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 IGHDP01880 384 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 PRKAR2AP13861 404 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 PTPREP23469 700 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 DSG3P32926 999 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 AAMPQ13685 434 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 DPF3Q92784 378 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 APBA2Q99767 749 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 MOV10L1Q9BXT6 1211 aaKnown RBP19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 NACAP1Q9BZK3 213 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 CRISPLD2Q9H0B8 497 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 FBXO28Q9NVF7 368 aa19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 GREB1LQ9C091 1923 aaPredicted RBP19.64■□□□□ 0.73
NCKIPSD-208ENST00000454134 A0A0G2JMZ2 1700 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 SLC15A5A6NIM6 579 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 PLS1Q14651 629 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 MAP3K21Q5TCX8 1036 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 SMC5Q8IY18 1101 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 EVI5LQ96CN4 794 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 SPATC1LQ9H0A9 340 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 NAPBQ9H115 298 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 RWDD1Q9H446 243 aaPredicted RBP19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 GOPCQ9HD26 462 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 IVNS1ABPQ9Y6Y0 642 aa19.63■□□□□ 0.73
NCKIPSD-208ENST00000454134 H0YGN5 161 aa19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 FOXP2O15409 715 aa19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 CACNB2Q08289 660 aaPredicted RBP19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 TRMT44Q8IYL2 757 aaKnown RBP19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 ZNF444Q8N0Y2 327 aaPredicted RBP19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 NUP88Q99567 741 aaPredicted RBP19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 FLRT1Q9NZU1 646 aa19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
NCKIPSD-208ENST00000454134 PARP14Q460N5 1801 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 ERCC3P19447 782 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 GRB14Q14449 540 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 MB21D1Q8N884 522 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 NPLOC4Q8TAT6 608 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 DIS3LQ8TF46 1054 aaKnown RBP19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 CLIP2Q9UDT6 1046 aa19.61■□□□□ 0.73
NCKIPSD-208ENST00000454134 IGKV6D-41A0A0C4DH26 115 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 CCND3P30281 292 aaPredicted RBP19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 PPARAQ07869 468 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 PAWRQ96IZ0 340 aaKnown RBP19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 FAM227BQ96M60 508 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 HTATIP2Q9BUP3 242 aa19.6■□□□□ 0.73
NCKIPSD-208ENST00000454134 ZNF287Q9HBT7 754 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms