RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 ARL1P40616 181 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-207ENST00000453963 LONRF2Q1L5Z9 754 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 FEZ2Q9UHY8 353 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-207ENST00000453963 ANAPC4Q9UJX5 808 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 USP21Q9UK80 565 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 EPN1Q9Y6I3 576 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-207ENST00000453963 CCDC151A5D8V7 595 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 TAF5LO75529 589 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 HERC4Q5GLZ8 1057 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-207ENST00000453963 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
SEC16A-207ENST00000453963 ZMYM6O95789 1325 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 HSPD1P10809 573 aaKnown RBP13.33□□□□□ -0.27
SEC16A-207ENST00000453963 TCIRG1Q13488 830 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 HAUS7Q99871 368 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 PPANQ9NQ55 473 aaKnown RBP13.33□□□□□ -0.27
SEC16A-207ENST00000453963 FAM207AQ9NSI2 230 aaPredicted RBP13.33□□□□□ -0.27
SEC16A-207ENST00000453963 KDM5CP41229 1560 aa13.33□□□□□ -0.27
SEC16A-207ENST00000453963 ADCY9O60503 1353 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 BACH1O14867 736 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 GNA14O95837 355 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 CTNNA1P35221 906 aaKnown RBP13.33□□□□□ -0.28
SEC16A-207ENST00000453963 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 CTTNBP2NLQ9P2B4 639 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
SEC16A-207ENST00000453963 SARNPP82979 210 aaKnown RBP13.33□□□□□ -0.28
SEC16A-207ENST00000453963 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 DENND2CQ68D51 928 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
SEC16A-207ENST00000453963 VCXQ9H320 206 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 ASIC3Q9UHC3 531 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 NDC80O14777 642 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 SCRN1Q12765 414 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 EXOC4Q96A65 974 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
SEC16A-207ENST00000453963 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
SEC16A-207ENST00000453963 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 KDRP35968 1356 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 RNF40O75150 1001 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 PRDM1O75626 825 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 MAST3O60307 1309 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 PHKG2P15735 406 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 PCDHA5Q9Y5H7 936 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 PPP6R2O75170 966 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 LIG3P49916 1009 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■□□ 16.9
SEC16A-207ENST00000453963 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 SLC8A1P32418 973 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 RASSF2P50749 326 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 GKAP1Q5VSY0 366 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-207ENST00000453963 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 PPP1R12CQ9BZL4 782 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
SEC16A-207ENST00000453963 ADD1P35611 737 aaKnown RBP13.31□□□□□ -0.28
SEC16A-207ENST00000453963 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-207ENST00000453963 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 MAIP1Q8WWC4 291 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 FAM204AQ9H8W3 233 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 CLIC4Q9Y696 253 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 MROH5Q6ZUA9 1318 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 H0YIN7 160 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-207ENST00000453963 WDR44Q5JSH3 913 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 HHATQ5VTY9 493 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 NLRC4Q9NPP4 1024 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 AMFRQ9UKV5 643 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 NOL3O60936 208 aaKnown RBP13.31□□□□□ -0.28
SEC16A-207ENST00000453963 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 GRM1Q13255 1194 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 CCDC14Q49A88 953 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 LIN9Q5TKA1 542 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 DYMQ7RTS9 669 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 CCDC105Q8IYK2 499 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 SPATA5Q8NB90 893 aa13.31□□□□□ -0.28
SEC16A-207ENST00000453963 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms