RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 MYCP01106 439 aaPredicted RBP11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 GNRH1P01148 92 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 APPP05067 770 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 CDK8P49336 464 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 RGS19P49795 217 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 FCGRTP55899 365 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 SLC9C1Q4G0N8 1177 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 SMC5Q8IY18 1101 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 SH3TC2Q8TF17 1288 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 MYPNQ86TC9 1320 aa11.34□□□□□ -0.59
CDC42EP3-203ENST00000453555 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 MINDY4BA8MYZ0 360 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 PEX10O60683 326 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 AKR1B1P15121 316 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 HOXD10P28358 340 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 EPB41L4AQ9HCS5 686 aaPredicted RBP11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 ARPP21Q9UBL0 812 aaPredicted RBP11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 SRRDQ9UH36 339 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
CDC42EP3-203ENST00000453555 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 TNPO2O14787 897 aaKnown RBP11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 GNAT2P19087 354 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 TDO2P48775 406 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP14P54578 494 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 PRMT2P55345 433 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 HERVK_113P62684 666 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 NUCB1Q02818 461 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 PRKCZQ05513 592 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 FAM110CQ1W6H9 321 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 ZMYM1Q5SVZ6 1142 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 CHD1LQ86WJ1 897 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 ARMC5Q96C12 935 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 GREB1LQ9C091 1923 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
CDC42EP3-203ENST00000453555 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 RILPL2Q969X0 211 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 ZNF333Q96JL9 665 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 CCDC17Q96LX7 622 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 RLFQ13129 1914 aa11.31□□□□□ -0.6
CDC42EP3-203ENST00000453555 COL11A1P12107 1806 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 HTTP42858 3142 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 VCAM1P19320 739 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 GRK4P32298 578 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 FLT3LGP49771 235 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 ICA1Q05084 483 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 COA7Q96BR5 231 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 NACAP1Q9BZK3 213 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 MKNK2Q9HBH9 465 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 ARHGEF10LQ9HCE6 1279 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 RBPJLQ9UBG7 517 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-203ENST00000453555 ADCY3O60266 1144 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 PRDM1O75626 825 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 PPP1R37O75864 691 aa11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-203ENST00000453555 RASA1P20936 1047 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms