RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SPDYE16A6NNV3 312 aaPredicted RBP15.44■□□□□ 0.06
CHD3-206ENST00000452447 GPAA1O43292 621 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 APPP05067 770 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 GNAT2P19087 354 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 ATP2B2Q01814 1243 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 TRIB2Q92519 343 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
CHD3-206ENST00000452447 GSG1L2A8MUP6 293 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 MINDY4BA8MYZ0 360 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 CNMDO75829 334 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 SLC34A2O95436 690 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
CHD3-206ENST00000452447 MX1P20591 662 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 TRIM32Q13049 653 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 SPICE1Q8N0Z3 855 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 OTUD7AQ8TE49 926 aaPredicted RBP15.43■□□□□ 0.06
CHD3-206ENST00000452447 FSD1Q9BTV5 496 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 MKNK2Q9HBH9 465 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 BTBD7Q9P203 1132 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 IVNS1ABPQ9Y6Y0 642 aa15.43■□□□□ 0.06
CHD3-206ENST00000452447 FLOT1O75955 427 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 TDO2P48775 406 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 MORN1Q5T089 497 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 UBE2Q1Q7Z7E8 422 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 STK11IPQ8N1F8 1099 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 CRISPLD2Q9H0B8 497 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 TRIOBPQ9H2D6 2365 aa15.42■□□□□ 0.06
CHD3-206ENST00000452447 M0R2C6 588 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
CHD3-206ENST00000452447 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
CHD3-206ENST00000452447 MAP2K5Q13163 448 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 USP6NLQ92738 828 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 APBA2Q99767 749 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 ZNF287Q9HBT7 754 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 WDR46O15213 610 aaKnown RBP15.41■□□□□ 0.06
CHD3-206ENST00000452447 RAD21O60216 631 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 PTPREP23469 700 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
CHD3-206ENST00000452447 KIAA1755Q5JYT7 1200 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
CHD3-206ENST00000452447 MB21D1Q8N884 522 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 GOPCQ9HD26 462 aa15.41■□□□□ 0.06
CHD3-206ENST00000452447 RLFQ13129 1914 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 SLC15A5A6NIM6 579 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 PATL2C9JE40 543 aaKnown RBP15.4■□□□□ 0.06
CHD3-206ENST00000452447 H0YGN5 161 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 DSG3P32926 999 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 AAMPQ13685 434 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 PLS1Q14651 629 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 CCL14Q16627 93 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 MAP3K21Q5TCX8 1036 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 IFNL3Q8IZI9 196 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
CHD3-206ENST00000452447 NR2E3Q9Y5X4 410 aa15.4■□□□□ 0.06
CHD3-206ENST00000452447 NECAB2Q7Z6G3 386 aa15.39■□□□□ 0.05
CHD3-206ENST00000452447 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
CHD3-206ENST00000452447 ANKLE1Q8NAG6 615 aa15.39■□□□□ 0.05
CHD3-206ENST00000452447 SEC62Q99442 399 aaKnown RBP15.39■□□□□ 0.05
CHD3-206ENST00000452447 MOV10L1Q9BXT6 1211 aaKnown RBP15.39■□□□□ 0.05
CHD3-206ENST00000452447 SPATC1LQ9H0A9 340 aa15.39■□□□□ 0.05
CHD3-206ENST00000452447 EPB41L4AQ9HCS5 686 aaPredicted RBP15.39■□□□□ 0.05
CHD3-206ENST00000452447 RANBP2P49792 3224 aaKnown RBP15.38■□□□□ 0.05
CHD3-206ENST00000452447 RASA1P20936 1047 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
CHD3-206ENST00000452447 GRB14Q14449 540 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 ZMYM1Q5SVZ6 1142 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 DPP9Q86TI2 863 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 ATG4CQ96DT6 458 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 NAPBQ9H115 298 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 ROBO3Q96MS0 1386 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 MYH4Q9Y623 1939 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 PARP14Q460N5 1801 aa15.38■□□□□ 0.05
CHD3-206ENST00000452447 STRNO43815 780 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 EVI5O60447 810 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 SLC3A2P08195 630 aaKnown RBP15.37■□□□□ 0.05
CHD3-206ENST00000452447 ERCC3P19447 782 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
CHD3-206ENST00000452447 NCAPG2Q86XI2 1143 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 SHCBP1Q8NEM2 672 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 EVI5LQ96CN4 794 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHD3-206ENST00000452447 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
CHD3-206ENST00000452447 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
CHD3-206ENST00000452447 GREB1LQ9C091 1923 aaPredicted RBP15.37■□□□□ 0.05
CHD3-206ENST00000452447 PRDM1O75626 825 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 HOXC6P09630 235 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 PDE4BQ07343 736 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 MROH8Q9H579 483 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 OGDHLQ9ULD0 1010 aa15.36■□□□□ 0.05
CHD3-206ENST00000452447 COLQQ9Y215 455 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms