RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 ANKLE1Q8NAG6 615 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
TOM1-211ENST00000449508 PTPREP23469 700 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 ICA1Q05084 483 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
TOM1-211ENST00000449508 MAP2K5Q13163 448 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 C16orf86Q6ZW13 317 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
TOM1-211ENST00000449508 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
TOM1-211ENST00000449508 SH2D4AQ9H788 454 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 PCDH10Q9P2E7 1040 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 TMX2Q9Y320 296 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
TOM1-211ENST00000449508 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 ATP2B2Q01814 1243 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 SPICE1Q8N0Z3 855 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 APBA2Q99767 749 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 NBPF3Q9H094 633 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
TOM1-211ENST00000449508 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
TOM1-211ENST00000449508 LPAR1Q92633 364 aa16.44■□□□□ 0.22
TOM1-211ENST00000449508 OSBP2Q969R2 916 aa16.44■□□□□ 0.22
TOM1-211ENST00000449508 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
TOM1-211ENST00000449508 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
TOM1-211ENST00000449508 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
TOM1-211ENST00000449508 RLFQ13129 1914 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 FLOT1O75955 427 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 ZFYP08048 801 aaPredicted RBP16.43■□□□□ 0.22
TOM1-211ENST00000449508 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
TOM1-211ENST00000449508 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
TOM1-211ENST00000449508 DSG3P32926 999 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
TOM1-211ENST00000449508 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
TOM1-211ENST00000449508 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 APPBP2Q92624 585 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
TOM1-211ENST00000449508 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
TOM1-211ENST00000449508 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
TOM1-211ENST00000449508 GRB14Q14449 540 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 PLS1Q14651 629 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
TOM1-211ENST00000449508 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 C11orf49Q9H6J7 331 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 MKNK2Q9HBH9 465 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
TOM1-211ENST00000449508 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
TOM1-211ENST00000449508 ERC2O15083 957 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
TOM1-211ENST00000449508 STRNO43815 780 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 RAD21O60216 631 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 APPP05067 770 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 HOXC6P09630 235 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
TOM1-211ENST00000449508 LHX8Q68G74 356 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 NPLOC4Q8TAT6 608 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
TOM1-211ENST00000449508 M0R2C6 588 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 GPAA1O43292 621 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 GNAT2P19087 354 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 ERCC3P19447 782 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 CNGA1P29973 690 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 NCAPG2Q86XI2 1143 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 MROH8Q9H579 483 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
TOM1-211ENST00000449508 ZNFX1Q9P2E3 1918 aaKnown RBP16.39■□□□□ 0.21
TOM1-211ENST00000449508 PATL2C9JE40 543 aaKnown RBP16.39■□□□□ 0.21
TOM1-211ENST00000449508 ADORA2AP29274 412 aa16.39■□□□□ 0.21
TOM1-211ENST00000449508 CYP2C19P33261 490 aa16.39■□□□□ 0.21
TOM1-211ENST00000449508 TDO2P48775 406 aa16.39■□□□□ 0.21
TOM1-211ENST00000449508 C7orf61Q8IZ16 206 aa16.39■□□□□ 0.21
TOM1-211ENST00000449508 PI4K2BQ8TCG2 481 aa16.39■□□□□ 0.21
TOM1-211ENST00000449508 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
TOM1-211ENST00000449508 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.39■□□□□ 0.21
TOM1-211ENST00000449508 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
TOM1-211ENST00000449508 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 RASA1P20936 1047 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 IFNL3Q8IZI9 196 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
TOM1-211ENST00000449508 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
TOM1-211ENST00000449508 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 SLC5A4Q9NY91 659 aa16.38■□□□□ 0.21
TOM1-211ENST00000449508 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms