RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 GPBP1L1Q9HC44 474 aaPredicted RBP13.82□□□□□ -0.2
SMIM8-205ENST00000448282 CSADQ9Y600 493 aa13.82□□□□□ -0.2
SMIM8-205ENST00000448282 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 LARGE1O95461 756 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
SMIM8-205ENST00000448282 SLC4A3P48751 1232 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 CCT2P78371 535 aaKnown RBP13.81□□□□□ -0.2
SMIM8-205ENST00000448282 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 SCRN1Q12765 414 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
SMIM8-205ENST00000448282 PRAMEF18Q5VWM3 479 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
SMIM8-205ENST00000448282 GMCL1P1Q8NEA9 526 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 GOPCQ9HD26 462 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
SMIM8-205ENST00000448282 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
SMIM8-205ENST00000448282 SLURP2P0DP57 97 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 PDCP20941 246 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 GUCY1A2P33402 732 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 RRP1BQ14684 758 aaKnown RBP13.8□□□□□ -0.2
SMIM8-205ENST00000448282 GRM4Q14833 912 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 ASPRV1Q53RT3 343 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
SMIM8-205ENST00000448282 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 29.8
SMIM8-205ENST00000448282 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
SMIM8-205ENST00000448282 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
SMIM8-205ENST00000448282 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
SMIM8-205ENST00000448282 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 USP14P54578 494 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
SMIM8-205ENST00000448282 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 LRRC47Q8N1G4 583 aaKnown RBP13.79□□□□□ -0.2
SMIM8-205ENST00000448282 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 WASF1Q92558 559 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 FEZ1Q99689 392 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 MYL10Q9BUA6 226 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
SMIM8-205ENST00000448282 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
SMIM8-205ENST00000448282 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 POTEIP0CG38 1075 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
SMIM8-205ENST00000448282 IFNAR1P17181 557 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 INPP5BP32019 993 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 TMTC3Q6ZXV5 915 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 CCDC144CPQ8IYA2 1237 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
SMIM8-205ENST00000448282 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 NCOA5Q9HCD5 579 aaKnown RBP13.78□□□□□ -0.2
SMIM8-205ENST00000448282 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
SMIM8-205ENST00000448282 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
SMIM8-205ENST00000448282 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 C19orf81C9J6K1 198 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 F5H6K3 240 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 SNHG28P0DPA3 235 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 PDHBP11177 359 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 PTPRAP18433 802 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 RXRAP19793 462 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
SMIM8-205ENST00000448282 SLC1A4P43007 532 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 JAG1P78504 1218 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 KLRC3Q07444 240 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
SMIM8-205ENST00000448282 PRKG1Q13976 671 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 NSUN7Q8NE18 718 aaKnown RBP13.77□□□□□ -0.21
SMIM8-205ENST00000448282 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 LPAR1Q92633 364 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 ZKSCAN4Q969J2 545 aaPredicted RBP13.77□□□□□ -0.21
SMIM8-205ENST00000448282 KIAA1683Q9H0B3 1180 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
SMIM8-205ENST00000448282 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
SMIM8-205ENST00000448282 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 RAD21O60216 631 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 GJB2P29033 226 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 CDC27P30260 824 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 NUCB2P80303 420 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 VGLL4Q14135 290 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 RGS22Q8NE09 1264 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 RNF26Q9BY78 433 aaPredicted RBP13.76□□□□□ -0.21
SMIM8-205ENST00000448282 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
SMIM8-205ENST00000448282 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
SMIM8-205ENST00000448282 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms