RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 PDHXO00330 501 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 USP17L2Q6R6M4 530 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 JAKMIP1Q96N16 626 aaKnown RBP15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 ZSCAN10Q96SZ4 725 aaPredicted RBP15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 TMEM47Q9BQJ4 181 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 VCPKMTQ9H867 229 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 TCP11L1Q9NUJ3 509 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 RNF186Q9NXI6 227 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
HLA-DOB-207ENST00000447394 C19orf81C9J6K1 198 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 PRC1O43663 620 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 TRPA1O75762 1119 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 NDUFB10O96000 172 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 CYP2C8P10632 490 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 NOVP48745 357 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 ANKRD23Q86SG2 305 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 PROCA1Q8NCQ7 364 aaPredicted RBP15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 C12orf42Q96LP6 360 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 NEK1Q96PY6 1258 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 UBAC1Q9BSL1 405 aa15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 RPAP3Q9H6T3 665 aaPredicted RBP15.62■□□□□ 0.09
HLA-DOB-207ENST00000447394 IFIT3O14879 490 aaKnown RBP15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 PEX10O60683 326 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 TBC1D8O95759 1140 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 CRHR2Q13324 411 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 SEC23AQ15436 765 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 TSGA10IPQ3SY00 556 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 FASTKD5Q7L8L6 764 aaKnown RBP15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 IQCA1Q86XH1 822 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 SH2D4AQ9H788 454 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 MGAMO43451 1857 aa15.61■□□□□ 0.09
HLA-DOB-207ENST00000447394 F5H6K3 240 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 HSPA1AP0DMV8 641 aaKnown RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 HSPA1BP0DMV9 641 aaKnown RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 MCCP23508 829 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 USP14P54578 494 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 INHBEP58166 350 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 MAP2K1Q02750 393 aaPredicted RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 KLRC3Q07444 240 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 MKL1Q969V6 931 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 TANGO6Q9C0B7 1094 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 GOPCQ9HD26 462 aa15.6■□□□□ 0.09
HLA-DOB-207ENST00000447394 CASP8AP2Q9UKL3 1982 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 SH2B2O14492 632 aaPredicted RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 MCM5P33992 734 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 KRT32Q14532 448 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 TMEM67Q5HYA8 995 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 SLFN13Q68D06 897 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 IGDCC4Q8TDY8 1250 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 UPF3BQ9BZI7 483 aaKnown RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 LY9Q9HBG7 655 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 FBXO28Q9NVF7 368 aa15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 ISY1Q9ULR0 285 aaKnown RBP15.59■□□□□ 0.09
HLA-DOB-207ENST00000447394 FOXN1O15353 648 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 ECM2O94769 699 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 EXOSC10Q01780 885 aaKnown RBP15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 IFIT1BQ5T764 474 aaKnown RBP15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 KCTD1Q719H9 257 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 RAB11FIP4Q86YS3 637 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 GMCL1P1Q8NEA9 526 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 CPA4Q9UI42 421 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 FRMPD2Q68DX3 1309 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 MYH6P13533 1939 aa15.58■□□□□ 0.08
HLA-DOB-207ENST00000447394 WDR46O15213 610 aaKnown RBP15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 RPS6KB1P23443 525 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 WTAPQ15007 396 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 CCDC96Q2M329 555 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 CATSPERGQ6ZRH7 1159 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 PNMA1Q8ND90 353 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 ANKS1AQ92625 1134 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 LPAR1Q92633 364 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 P2RX7Q99572 595 aaKnown RBP15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 MYL10Q9BUA6 226 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 BACH2Q9BYV9 841 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 KAT14Q9H8E8 782 aa15.57■□□□□ 0.08
HLA-DOB-207ENST00000447394 ERICH2A1L162 156 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L15C9J2P7 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L13C9JLJ4 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L11C9JVI0 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L18D6R9N7 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L22D6RA61 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L17D6RBQ6 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L19D6RCP7 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L20D6RJB6 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 CA12O43570 354 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms