RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GPS2Q13227 327 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 NPY5RQ15761 445 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 E2F4Q16254 413 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CATIPQ7Z7H3 387 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 ADGRA1Q86SQ6 560 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 TMTC1Q8IUR5 882 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 PYM1Q9BRP8 204 aaKnown RBP21.62■■□□□ 1.05
SDCBP-204ENST00000447182 ANKZF1Q9H8Y5 726 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 DISP2A7MBM2 1401 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 PCP11498 1178 aaKnown RBP21.62■■□□□ 1.05
SDCBP-204ENST00000447182 FXR1P51114 621 aaKnown RBP eCLIP21.62■■□□□ 1.05
SDCBP-204ENST00000447182 CCDC152Q4G0S7 254 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 SMYD4Q8IYR2 804 aaPredicted RBP21.62■■□□□ 1.05
SDCBP-204ENST00000447182 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 MYO1AQ9UBC5 1043 aa21.62■■□□□ 1.05
SDCBP-204ENST00000447182 V9GY48 417 aaPredicted RBP21.62■■□□□ 1.05
SDCBP-204ENST00000447182 MAGEB6P1A0A0J9YX57 407 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 A0A0U1RQJ8 604 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 CTAGE9A4FU28 777 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 WNT7AO00755 349 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 FGRP09769 529 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 IGHMBP2P38935 993 aaKnown RBP21.61■■□□□ 1.05
SDCBP-204ENST00000447182 HNRNPH2P55795 449 aaKnown RBP21.61■■□□□ 1.05
SDCBP-204ENST00000447182 SPAG1Q07617 926 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 TROAPQ12815 778 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 ZNF569Q5MCW4 686 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
SDCBP-204ENST00000447182 ATRIPQ8WXE1 791 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 ZCCHC17Q9NP64 241 aaKnown RBP21.61■■□□□ 1.05
SDCBP-204ENST00000447182 XDHP47989 1333 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 PRDM1O75626 825 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 PLEKHA8P1O95397 391 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 TRIM14Q14142 442 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 KRT31Q15323 416 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 IQUBQ8NA54 791 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 PSD3Q9NYI0 1048 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 RWDD2AQ9UIY3 292 aa21.61■■□□□ 1.05
SDCBP-204ENST00000447182 DDAH1O94760 285 aa21.6■■□□□ 1.05
SDCBP-204ENST00000447182 ST5P78524 1137 aa21.6■■□□□ 1.05
SDCBP-204ENST00000447182 ZNF174Q15697 407 aa21.6■■□□□ 1.05
SDCBP-204ENST00000447182 BEND6Q5SZJ8 279 aaPredicted RBP21.6■■□□□ 1.05
SDCBP-204ENST00000447182 RIOK1Q9BRS2 568 aaKnown RBP21.6■■□□□ 1.05
SDCBP-204ENST00000447182 CTNND2Q9UQB3 1225 aa21.6■■□□□ 1.05
SDCBP-204ENST00000447182 ZNF804BA4D1E1 1349 aa21.6■■□□□ 1.05
SDCBP-204ENST00000447182 MYH8P13535 1937 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 TRAPPC10P48553 1259 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 EIF5P55010 431 aaKnown RBP21.59■■□□□ 1.05
SDCBP-204ENST00000447182 PTGDRQ13258 359 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 MUM1L1Q5H9M0 696 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 TMTC3Q6ZXV5 915 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 IQCA1Q86XH1 822 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 BRIP1Q9BX63 1249 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 ABHD10Q9NUJ1 306 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 TULP2O00295 520 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 KIF4BQ2VIQ3 1234 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 PDXDC2PQ6P474 469 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 CYP26C1Q6V0L0 522 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 EXOC4Q96A65 974 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 SLAIN2Q9P270 581 aa21.59■■□□□ 1.05
SDCBP-204ENST00000447182 PUF60Q9UHX1 559 aaKnown RBP21.59■■□□□ 1.05
SDCBP-204ENST00000447182 LAMB2P55268 1798 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 CACNA1SQ13698 1873 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 GTPBP6O43824 516 aaPredicted RBP21.58■■□□□ 1.05
SDCBP-204ENST00000447182 ERVK-24P63145 666 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 CHRNDQ07001 517 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 SLC35F6Q8N357 371 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 ZSWIM4Q9H7M6 989 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 PHLPP1O60346 1717 aa21.58■■□□□ 1.05
SDCBP-204ENST00000447182 N4BP3O15049 544 aa21.58■■□□□ 1.04
SDCBP-204ENST00000447182 ERLIN1O75477 346 aa21.58■■□□□ 1.04
SDCBP-204ENST00000447182 WHAMMP3Q1A5X7 153 aa21.58■■□□□ 1.04
SDCBP-204ENST00000447182 NAPGQ99747 312 aaPredicted RBP21.58■■□□□ 1.04
SDCBP-204ENST00000447182 CNTNAP5Q8WYK1 1306 aa21.58■■□□□ 1.04
SDCBP-204ENST00000447182 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.04
SDCBP-204ENST00000447182 hCG_1642624A0A1W2PR95 340 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 SMIM22K7EJ46 135 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 TUBBP07437 444 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 COPB1P53618 953 aaKnown RBP21.57■■□□□ 1.04
SDCBP-204ENST00000447182 PAK1Q13153 545 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 HDXQ7Z353 690 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 ACRBPQ8NEB7 543 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 NEK11Q8NG66 645 aa21.57■■□□□ 1.04
SDCBP-204ENST00000447182 CCT6AP40227 531 aaKnown RBP21.56■■□□□ 1.04
SDCBP-204ENST00000447182 ARHGAP25P42331 645 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 NOM1Q5C9Z4 860 aaKnown RBP21.56■■□□□ 1.04
SDCBP-204ENST00000447182 TCP11X2Q5H9J9 407 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 RRAGBQ5VZM2 374 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 ANKRD20A12PQ8NF67 263 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 MYH13Q9UKX3 1938 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 BAZ2AQ9UIF9 1905 aaKnown RBP21.56■■□□□ 1.04
SDCBP-204ENST00000447182 H3BQF6 201 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 ZNF658Q5TYW1 1059 aaPredicted RBP21.56■■□□□ 1.04
SDCBP-204ENST00000447182 PNKPQ96T60 521 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 MTRQ99707 1265 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 RMND1Q9NWS8 449 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 ABCF2Q9UG63 623 aa21.56■■□□□ 1.04
SDCBP-204ENST00000447182 L1RE1Q9UN81 338 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms