RNA–Protein interactions for RNA: ENST00000447048.1

RUBCN-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-205ENST00000447048 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
RUBCN-205ENST00000447048 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
RUBCN-205ENST00000447048 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
RUBCN-205ENST00000447048 TMX2Q9Y320 296 aa11.34□□□□□ -0.59
RUBCN-205ENST00000447048 A0A1W2PRG0 241 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
RUBCN-205ENST00000447048 PRC1O43663 620 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 TOP1P11387 765 aaKnown RBP11.33□□□□□ -0.6
RUBCN-205ENST00000447048 CASTP20810 708 aaKnown RBP11.33□□□□□ -0.6
RUBCN-205ENST00000447048 PSMA5P28066 241 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 INHBEP58166 350 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
RUBCN-205ENST00000447048 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 BLOC1S2Q6QNY1 142 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 USP17L2Q6R6M4 530 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 DGKHQ86XP1 1220 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 BRI3BPQ8WY22 251 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 LPAR1Q92633 364 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 TM6SF1Q9BZW5 370 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 CLIP2Q9UDT6 1046 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 AGTPBP1Q9UPW5 1226 aa11.33□□□□□ -0.6
RUBCN-205ENST00000447048 ZSWIM8A7E2V4 1837 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 IFIT3O14879 490 aaKnown RBP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 VCAM1P19320 739 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 RBM25P49756 843 aaKnown RBP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 DGKZQ13574 1117 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 MOGSQ13724 837 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 WTAPQ15007 396 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 SEC23AQ15436 765 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 SIAH1Q8IUQ4 282 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 MKL1Q969V6 931 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 TTC14Q96N46 770 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 C22orf23Q9BZE7 217 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 ZCCHC17Q9NP64 241 aaKnown RBP11.32□□□□□ -0.6
RUBCN-205ENST00000447048 SLC45A1Q9Y2W3 748 aa11.32□□□□□ -0.6
RUBCN-205ENST00000447048 ZNF236Q9UL36 1845 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
RUBCN-205ENST00000447048 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
RUBCN-205ENST00000447048 NDUFB10O96000 172 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 RPS6KB1P23443 525 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 TM4SF4P48230 202 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
RUBCN-205ENST00000447048 TREML2Q5T2D2 321 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 OTUD7BQ6GQQ9 843 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
RUBCN-205ENST00000447048 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 ANKS1AQ92625 1134 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 KAT14Q9H8E8 782 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 EMILIN3Q9NT22 766 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
RUBCN-205ENST00000447048 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 F5H6K3 240 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 RAD21O60216 631 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 KLRC3Q07444 240 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 DCAF4Q8WV16 495 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 TBC1D32Q96NH3 1257 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
RUBCN-205ENST00000447048 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
RUBCN-205ENST00000447048 PDHXO00330 501 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 CPA1P15085 419 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 LIFRP42702 1097 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 FGD1P98174 961 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
RUBCN-205ENST00000447048 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
RUBCN-205ENST00000447048 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 SLFN13Q68D06 897 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 IGDCC4Q8TDY8 1250 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 TCEANC2Q96MN5 208 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
RUBCN-205ENST00000447048 PTPN18Q99952 460 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
RUBCN-205ENST00000447048 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
RUBCN-205ENST00000447048 NID2Q14112 1375 aa11.28□□□□□ -0.6
RUBCN-205ENST00000447048 CCDC69A6NI79 296 aa11.28□□□□□ -0.6
RUBCN-205ENST00000447048 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms