RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ARHGEF25Q86VW2 580 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 GIMAP8Q8ND71 665 aaPredicted RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 ATP6V0A1Q93050 837 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 TRIM7Q9C029 511 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 METTL14Q9HCE5 456 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF215Q9UL58 517 aaPredicted RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 CDK12Q9NYV4 1490 aaPredicted RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 TYRO3Q06418 890 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
PTPN3-204ENST00000446349 LARSQ9P2J5 1176 aaKnown RBP9.49□□□□□ -0.89
PTPN3-204ENST00000446349 SGSM2O43147 1006 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PTPREP23469 700 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 ICA1Q05084 483 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PAK1Q13153 545 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 DMP1Q13316 513 aaPredicted RBP9.48□□□□□ -0.89
PTPN3-204ENST00000446349 ZSCAN23Q3MJ62 389 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 FAM160B2Q86V87 743 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 IMPACTQ9P2X3 320 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 KRT10P13645 584 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 LTKP29376 864 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 TBC1D8BQ0IIM8 1120 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 DPP9Q86TI2 863 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 AOPEPQ8N6M6 819 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PSTPIP2Q9H939 334 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 KCNH3Q9ULD8 1083 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
PTPN3-204ENST00000446349 CYP26C1Q6V0L0 522 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 ABI1Q8IZP0 508 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 CCDC63Q8NA47 563 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PARP2Q9UGN5 583 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 SPOPO43791 374 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 DAAM2Q86T65 1068 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 C10orf67Q8IYJ2 551 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 SUCLG2Q96I99 432 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 ZSCAN10Q96SZ4 725 aaPredicted RBP9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PIK3AP1Q6ZUJ8 805 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 MAPKAPK5Q8IW41 473 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.48□□□□□ -0.89
PTPN3-204ENST00000446349 USP19O94966 1318 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 TCP10Q12799 353 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PSMD1Q99460 953 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 RNF17Q9BXT8 1623 aaKnown RBP9.48□□□□□ -0.89
PTPN3-204ENST00000446349 SMC1BQ8NDV3 1235 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
PTPN3-204ENST00000446349 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 GCNT3O95395 438 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 TRAPPC10P48553 1259 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SURF1Q15526 300 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 ZNF174Q15697 407 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 DNM1Q05193 864 aaKnown RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 RAPGEF1Q13905 1077 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 HERC4Q5GLZ8 1057 aaPredicted RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 DCUN1D2Q6PH85 259 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 TTLL6Q8N841 843 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 WDR11Q9BZH6 1224 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SH3BP5O60239 455 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 EXOC3O60645 756 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SERPINB2P05120 415 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 RBM6P78332 1123 aaKnown RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CSGALNACT2Q8N6G5 542 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 AMNQ9BXJ7 453 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 COA1Q9GZY4 146 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 PDE8BO95263 885 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 TTLL1O95922 423 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 GNAT1P11488 350 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 BPIFB4P59827 614 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 MASTLQ96GX5 879 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CALCOCO1Q9P1Z2 691 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 ABCC3O15438 1527 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SKILP12757 684 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 TXKP42681 527 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 AK8Q96MA6 479 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CDC42BPBQ9Y5S2 1711 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SMCO2A6NFE2 343 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 FDX1P10109 184 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 DIS3L2Q8IYB7 885 aaKnown RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 LEO1Q8WVC0 666 aaPredicted RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CHMP2AO43633 222 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 CRCPO75575 148 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 APOBEC3FQ8IUX4 373 aaKnown RBP9.47□□□□□ -0.89
PTPN3-204ENST00000446349 SYNRGQ9UMZ2 1314 aa9.47□□□□□ -0.89
PTPN3-204ENST00000446349 USP17L3A6NCW0 530 aa9.46□□□□□ -0.89
PTPN3-204ENST00000446349 USP17L4A6NCW7 530 aa9.46□□□□□ -0.89
PTPN3-204ENST00000446349 EIF3CLB5ME19 914 aaKnown RBP9.46□□□□□ -0.89
PTPN3-204ENST00000446349 ITIH3Q06033 890 aa9.46□□□□□ -0.89
PTPN3-204ENST00000446349 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.89
PTPN3-204ENST00000446349 BBS5Q8N3I7 341 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms