RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 PTPN18Q99952 460 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 IL17RBQ9NRM6 502 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 EMILIN3Q9NT22 766 aa16.2■□□□□ 0.18
UBQLN3-202ENST00000445998 PDHXO00330 501 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 MOGSQ13724 837 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 TMTC2Q8N394 836 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 CFHR5Q9BXR6 569 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L11C9JVI0 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L18D6R9N7 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L22D6RA61 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L17D6RBQ6 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L19D6RCP7 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L20D6RJB6 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 F5H6K3 240 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 IGF2BP3O00425 579 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 WDR46O15213 610 aaKnown RBP16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 KLRC3Q07444 240 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 USP17L24Q0WX57 530 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 TAF1CQ15572 869 aaPredicted RBP16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 GPAT2Q6NUI2 795 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 ANKS1AQ92625 1134 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 PARK7Q99497 189 aaKnown RBP16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
UBQLN3-202ENST00000445998 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 RAD21O60216 631 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 NMT2O60551 498 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 TRPA1O75762 1119 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 ANAPC15P60006 121 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 IRX3P78415 501 aaPredicted RBP16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 GTF3C2Q8WUA4 911 aaPredicted RBP16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 WDR19Q8NEZ3 1342 aa16.17■□□□□ 0.18
UBQLN3-202ENST00000445998 VCAM1P19320 739 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 CYB5R4Q7L1T6 521 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 RASEFQ8IZ41 740 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 TNKSO95271 1327 aa16.16■□□□□ 0.18
UBQLN3-202ENST00000445998 PRC1O43663 620 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 COG2Q14746 738 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 WTAPQ15007 396 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 TREML2Q5T2D2 321 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 SLFN13Q68D06 897 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 TM6SF1Q9BZW5 370 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
UBQLN3-202ENST00000445998 TLR2O60603 784 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 BMP3P12645 472 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 SLC1A4P43007 532 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 SEC23AQ15436 765 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 MYPNQ86TC9 1320 aa16.14■□□□□ 0.17
UBQLN3-202ENST00000445998 TBC1D8O95759 1140 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 NDUFB10O96000 172 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 HSPA1AP0DMV8 641 aaKnown RBP16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 HSPA1BP0DMV9 641 aaKnown RBP16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 FDX1P10109 184 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 LIFRP42702 1097 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 CRHR2Q13324 411 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 FEM1BQ9UK73 627 aa16.13■□□□□ 0.17
UBQLN3-202ENST00000445998 PLA2G6O60733 806 aa16.12■□□□□ 0.17
UBQLN3-202ENST00000445998 SEC24BO95487 1268 aa16.12■□□□□ 0.17
UBQLN3-202ENST00000445998 ANTXR2P58335 489 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms