RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 AK7Q96M32 723 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 JAG2Q9Y219 1238 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 ABCC12Q96J65 1359 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 KRT2P35908 639 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 GYG1P46976 350 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-203ENST00000445889 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 CAPZA3Q96KX2 299 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 KRT9P35527 623 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 TRIML1Q8N9V2 468 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
ERCC3-203ENST00000445889 XDHP47989 1333 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 PBX1P40424 430 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 CDKAL1Q5VV42 579 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 RASGRP4Q8TDF6 673 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 ZNF512BQ96KM6 892 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-203ENST00000445889 SPEF2Q9C093 1822 aa16.09■□□□□ 0.17
ERCC3-203ENST00000445889 BRD3Q15059 726 aa16.08■□□□□ 0.17
ERCC3-203ENST00000445889 IL17AQ16552 155 aa16.08■□□□□ 0.17
ERCC3-203ENST00000445889 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.17
ERCC3-203ENST00000445889 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.17
ERCC3-203ENST00000445889 AKAP11Q9UKA4 1901 aa16.08■□□□□ 0.17
ERCC3-203ENST00000445889 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 PP2D1A8MPX8 630 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 MAP2K7O14733 419 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
ERCC3-203ENST00000445889 UBXN1Q04323 297 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-203ENST00000445889 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 CEP112Q8N8E3 955 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 KIF1AQ12756 1690 aa16.08■□□□□ 0.16
ERCC3-203ENST00000445889 ARHGAP25P42331 645 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 SEC23AQ15436 765 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 HDXQ7Z353 690 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 GSPT2Q8IYD1 628 aaKnown RBP16.07■□□□□ 0.16
ERCC3-203ENST00000445889 NELFBQ8WX92 580 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 RIN2Q8WYP3 895 aaPredicted RBP16.07■□□□□ 0.16
ERCC3-203ENST00000445889 L1RE1Q9UN81 338 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CDHR2Q9BYE9 1310 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CTAGE15A4D2H0 777 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 LRRIQ3A6PVS8 624 aaPredicted RBP16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CTAGE8P0CG41 777 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 SH3RF1Q7Z6J0 888 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CTAGE6Q86UF2 777 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 CTAGE4Q8IX94 777 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 PHF20Q9BVI0 1012 aa16.07■□□□□ 0.16
ERCC3-203ENST00000445889 COPB1P53618 953 aaKnown RBP16.06■□□□□ 0.16
ERCC3-203ENST00000445889 PMS1P54277 932 aaKnown RBP16.06■□□□□ 0.16
ERCC3-203ENST00000445889 HSPA2P54652 639 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 ESR2Q92731 530 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 EXOC4Q96A65 974 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-203ENST00000445889 NAPGQ99747 312 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-203ENST00000445889 MYO1CO00159 1063 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 ERCC3P19447 782 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 CASP8Q14790 479 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-203ENST00000445889 CNGA4Q8IV77 575 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 COL18A1P39060 1754 aa16.06■□□□□ 0.16
ERCC3-203ENST00000445889 KCNJ18B7U540 433 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 XBP1P17861 261 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 PRCPP42785 496 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 NLRP5P59047 1200 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 FUT2Q10981 343 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 KCNJ12Q14500 433 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 NPY5RQ15761 445 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 SRBD1Q8N5C6 995 aaKnown RBP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 GSDMAQ96QA5 445 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 RNF26Q9BY78 433 aaPredicted RBP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 REXO2Q9Y3B8 237 aaKnown RBP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 ATRNO75882 1429 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 NUP188Q5SRE5 1749 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 MAGEB6P1A0A0J9YX57 407 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 TNNT3P45378 269 aaPredicted RBP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 KLK7P49862 253 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 FKBP15Q5T1M5 1219 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 SMIM5Q71RC9 77 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 TMTC2Q8N394 836 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.16
ERCC3-203ENST00000445889 DUSP10Q9Y6W6 482 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 MROH5Q6ZUA9 1318 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 MYH7P12883 1935 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 USP17L21D6R901 530 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms