RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 MLKLQ8NB16 471 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 SMARCE1Q969G3 411 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
NCLP1-201ENST00000445357 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 IL17RBQ9NRM6 502 aa16.17■□□□□ 0.18
NCLP1-201ENST00000445357 CBFA2T2O43439 604 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 ATP1A3P13637 1013 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
NCLP1-201ENST00000445357 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 USP49Q70CQ1 688 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 TMC6Q7Z403 805 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
NCLP1-201ENST00000445357 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
NCLP1-201ENST00000445357 SERPINB2P05120 415 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 HOXA10P31260 410 aaPredicted RBP16.15■□□□□ 0.18
NCLP1-201ENST00000445357 HSP90AA2PQ14568 343 aaPredicted RBP16.15■□□□□ 0.18
NCLP1-201ENST00000445357 GRM4Q14833 912 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 CCDC34Q96HJ3 373 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 SH3GLB2Q9NR46 395 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 WNT7AO00755 349 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 BBOX1O75936 387 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 UFL1O94874 794 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 KCNJ6P48051 423 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 GNAQP50148 359 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 TPD52L1Q16890 204 aaPredicted RBP16.15■□□□□ 0.18
NCLP1-201ENST00000445357 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 DYNLL2Q96FJ2 89 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 C16orf45Q96MC5 204 aaPredicted RBP16.15■□□□□ 0.18
NCLP1-201ENST00000445357 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
NCLP1-201ENST00000445357 GPR75-ASB3A0A0A6YYF3 556 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 TNNT1P13805 278 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 CALML3P27482 149 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
NCLP1-201ENST00000445357 ARMCX5Q6P1M9 558 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 GPR101Q96P66 508 aaPredicted RBP16.14■□□□□ 0.17
NCLP1-201ENST00000445357 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 ANKRD31Q8N7Z5 1873 aa16.14■□□□□ 0.17
NCLP1-201ENST00000445357 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 SLFN14P0C7P3 912 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 NLRP5P59047 1200 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 NYAP1Q6ZVC0 841 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 PDILTQ8N807 584 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 ENOX1Q8TC92 643 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 CRAMP1Q96RY5 1269 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 MKNK2Q9HBH9 465 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 A0A087X0B3 334 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 KLRG2A4D1S0 409 aaPredicted RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 UBASH3AP57075 661 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 ZNF174Q15697 407 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 MTERF4Q7Z6M4 381 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 CCAR2Q8N163 923 aaKnown RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 DPF2Q92785 391 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
NCLP1-201ENST00000445357 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 PDCL3Q9H2J4 239 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 FANCLQ9NW38 375 aa16.13■□□□□ 0.17
NCLP1-201ENST00000445357 GAKO14976 1311 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 PLCG2P16885 1265 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 ZNF18P17022 549 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 RASA1P20936 1047 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 BTDP43251 543 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 SLC4A8Q2Y0W8 1093 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 VSTM4Q8IW00 320 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 ZNF287Q9HBT7 754 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 NRXN2Q9P2S2 1712 aa16.12■□□□□ 0.17
NCLP1-201ENST00000445357 USP27XA6NNY8 438 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 SERPINC1P01008 464 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PLCD1P51178 756 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 DDR1Q08345 913 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PTGDRQ13258 359 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 C16orf86Q6ZW13 317 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
NCLP1-201ENST00000445357 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 DHX58Q96C10 678 aa16.11■□□□□ 0.17
NCLP1-201ENST00000445357 FAM205AQ6ZU69 1335 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms