RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TOMM22Q9NS69 142 aa28.41■■■□□ 2.14
C9orf3-207ENST00000445181 EEF2P13639 858 aaKnown RBP28.4■■■□□ 2.14
C9orf3-207ENST00000445181 GRK4P32298 578 aa28.4■■■□□ 2.14
C9orf3-207ENST00000445181 FAM110CQ1W6H9 321 aa28.4■■■□□ 2.14
C9orf3-207ENST00000445181 C12orf42Q96LP6 360 aa28.4■■■□□ 2.14
C9orf3-207ENST00000445181 GABRQQ9UN88 632 aa28.4■■■□□ 2.14
C9orf3-207ENST00000445181 TNPO2O14787 897 aaKnown RBP28.39■■■□□ 2.14
C9orf3-207ENST00000445181 HOXA7P31268 230 aaPredicted RBP28.39■■■□□ 2.14
C9orf3-207ENST00000445181 FAM47AQ5JRC9 791 aa28.39■■■□□ 2.14
C9orf3-207ENST00000445181 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.39■■■□□ 2.14
C9orf3-207ENST00000445181 INCENPQ9NQS7 918 aa28.39■■■□□ 2.14
C9orf3-207ENST00000445181 MGAMO43451 1857 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 ZNF213O14771 459 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 VCAM1P19320 739 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 TFAP4Q01664 338 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 SIAH1Q8IUQ4 282 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 CTNNA3Q9UI47 895 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.38■■■□□ 2.13
C9orf3-207ENST00000445181 TMX2Q9Y320 296 aa28.38■■■□□ 2.13
C9orf3-207ENST00000445181 TSPY2A6NKD2 308 aa28.37■■■□□ 2.13
C9orf3-207ENST00000445181 RAD21O60216 631 aa28.37■■■□□ 2.13
C9orf3-207ENST00000445181 RANBP6O60518 1105 aaKnown RBP28.37■■■□□ 2.13
C9orf3-207ENST00000445181 RRP12Q5JTH9 1297 aaKnown RBP28.37■■■□□ 2.13
C9orf3-207ENST00000445181 P2RX7Q99572 595 aaKnown RBP28.37■■■□□ 2.13
C9orf3-207ENST00000445181 BIN2Q9UBW5 565 aaPredicted RBP28.37■■■□□ 2.13
C9orf3-207ENST00000445181 RBBP6Q7Z6E9 1792 aaKnown RBP28.37■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L15C9J2P7 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L13C9JLJ4 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L11C9JVI0 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L18D6R9N7 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L22D6RA61 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L17D6RBQ6 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L19D6RCP7 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L20D6RJB6 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 SGSM2O43147 1006 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 FLT3LGP49771 235 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 USP17L24Q0WX57 530 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 MFSD6Q6ZSS7 791 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 NEDD1Q8NHV4 660 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 COA7Q96BR5 231 aa28.36■■■□□ 2.13
C9orf3-207ENST00000445181 KIAA0100Q14667 2235 aaKnown RBP28.36■■■□□ 2.13
C9orf3-207ENST00000445181 MTFR1Q15390 333 aa28.35■■■□□ 2.13
C9orf3-207ENST00000445181 IMMTQ16891 758 aaKnown RBP28.35■■■□□ 2.13
C9orf3-207ENST00000445181 CEP95Q96GE4 821 aa28.35■■■□□ 2.13
C9orf3-207ENST00000445181 RNF41Q9H4P4 317 aaPredicted RBP28.35■■■□□ 2.13
C9orf3-207ENST00000445181 RPAP3Q9H6T3 665 aaPredicted RBP28.35■■■□□ 2.13
C9orf3-207ENST00000445181 VCPKMTQ9H867 229 aa28.35■■■□□ 2.13
C9orf3-207ENST00000445181 GOPCQ9HD26 462 aa28.35■■■□□ 2.13
C9orf3-207ENST00000445181 GREB1LQ9C091 1923 aaPredicted RBP28.35■■■□□ 2.13
C9orf3-207ENST00000445181 ORC4O43929 436 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 AKNAD1Q5T1N1 836 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 SPICE1Q8N0Z3 855 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 SLAIN1Q8ND83 568 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 LPAR1Q92633 364 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 NYAP2Q9P242 653 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 CLIP2Q9UDT6 1046 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 TACC3Q9Y6A5 838 aa28.34■■■□□ 2.13
C9orf3-207ENST00000445181 CENPFP49454 3210 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 IGKV6D-41A0A0C4DH26 115 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 ADCY3O60266 1144 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 HERVK_113P62684 666 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 CASC1Q6TDU7 716 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 TBC1D10CQ8IV04 446 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 TANGO6Q9C0B7 1094 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 MTMR4Q9NYA4 1195 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 MORF4L1Q9UBU8 362 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 PLIN4Q96Q06 1357 aa28.33■■■□□ 2.13
C9orf3-207ENST00000445181 TTLL1O95922 423 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 FGRP09769 529 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 PCP11498 1178 aaKnown RBP28.32■■■□□ 2.12
C9orf3-207ENST00000445181 UBXN2AP68543 259 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 IRF5Q13568 498 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 CATSPERGQ6ZRH7 1159 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 KIAA1211Q6ZU35 1233 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 STAG1Q8WVM7 1258 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 NBPF3Q9H094 633 aa28.32■■■□□ 2.12
C9orf3-207ENST00000445181 PTH1RQ03431 593 aa28.31■■■□□ 2.12
C9orf3-207ENST00000445181 KIAA1755Q5JYT7 1200 aa28.31■■■□□ 2.12
C9orf3-207ENST00000445181 PPP4R3BQ5MIZ7 849 aa28.31■■■□□ 2.12
C9orf3-207ENST00000445181 PDE4DIPQ5VU43 2346 aa28.31■■■□□ 2.12
C9orf3-207ENST00000445181 CCL5P13501 91 aa28.3■■■□□ 2.12
C9orf3-207ENST00000445181 ELNP15502 786 aa28.3■■■□□ 2.12
C9orf3-207ENST00000445181 PXYLP1Q8TE99 480 aa28.3■■■□□ 2.12
C9orf3-207ENST00000445181 GTF3C2Q8WUA4 911 aaPredicted RBP28.3■■■□□ 2.12
C9orf3-207ENST00000445181 ESYT1Q9BSJ8 1104 aa28.3■■■□□ 2.12
C9orf3-207ENST00000445181 U3KPZ7 1027 aaPredicted RBP28.3■■■□□ 2.12
C9orf3-207ENST00000445181 LAMA4Q16363 1823 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 WDR46O15213 610 aaKnown RBP28.29■■■□□ 2.12
C9orf3-207ENST00000445181 PEX10O60683 326 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 CDC45O75419 566 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 GPRC5AQ8NFJ5 357 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 TXNRD2Q9NNW7 524 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 RBPJLQ9UBG7 517 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 STX8Q9UNK0 236 aa28.29■■■□□ 2.12
C9orf3-207ENST00000445181 NMT2O60551 498 aa28.28■■■□□ 2.12
C9orf3-207ENST00000445181 PRPF38BQ5VTL8 546 aaKnown RBP28.28■■■□□ 2.12
C9orf3-207ENST00000445181 LRRC47Q8N1G4 583 aaKnown RBP28.28■■■□□ 2.12
C9orf3-207ENST00000445181 ESR2Q92731 530 aa28.28■■■□□ 2.12
C9orf3-207ENST00000445181 PAGR1Q9BTK6 254 aa28.28■■■□□ 2.12
C9orf3-207ENST00000445181 RNF208Q9H0X6 261 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms