RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 N4BP3O15049 544 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-210ENST00000444502 ODF2Q5BJF6 829 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 WWC2Q6AWC2 1192 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 GDF11O95390 407 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CFBP00751 764 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CAPN2P17655 700 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CMA1P23946 247 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CDC27P30260 824 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 SYCP1Q15431 976 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
TOP3B-210ENST00000444502 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
TOP3B-210ENST00000444502 DDX41Q9UJV9 622 aaKnown RBP11.94□□□□□ -0.5
TOP3B-210ENST00000444502 TRIM66O15016 1216 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 KCNB2Q92953 911 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CPDO75976 1380 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CHMP2AO43633 222 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 GNG11P61952 73 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 SLC39A14Q15043 492 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 TTC31Q49AM3 519 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CCDC93Q567U6 631 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 PTF1AQ7RTS3 328 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ADRA2BP18089 450 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ARID5BQ14865 1188 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 AOC3Q16853 763 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CERKLQ49MI3 558 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 TDRD7Q8NHU6 1098 aaKnown RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 CACTINQ8WUQ7 758 aaKnown RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 MMRN2Q9H8L6 949 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ZNF215Q9UL58 517 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 ALDH8A1Q9H2A2 487 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-210ENST00000444502 NFE2L3Q9Y4A8 694 aa11.93□□□□□ -0.5
TOP3B-210ENST00000444502 KNDC1Q76NI1 1749 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 ASIC1P78348 528 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 PCDHA5Q9Y5H7 936 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 CD209Q9NNX6 404 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 ARID4AP29374 1257 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 MNAT1P51948 309 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 MRPL12P52815 198 aaKnown RBP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
TOP3B-210ENST00000444502 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 GRAMD1CQ8IYS0 662 aa11.92□□□□□ -0.5
TOP3B-210ENST00000444502 DCCP43146 1447 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 TXKP42681 527 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 MTIF2P46199 727 aaKnown RBP11.91□□□□□ -0.5
TOP3B-210ENST00000444502 ANTXR2P58335 489 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 DTHD1Q6ZMT9 781 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 A0A1W2PQ27 194 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 A0A1W2PQ64 194 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 A0A1W2PQD8 194 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 CYP2D6P10635 497 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
TOP3B-210ENST00000444502 ICA1Q05084 483 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 POSTNQ15063 836 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 SYCP3Q8IZU3 236 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 PRM3Q9NNZ6 103 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 PIM2Q9P1W9 311 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 KIF13AQ9H1H9 1805 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 BMP15O95972 392 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 KARSQ15046 597 aaKnown RBP11.91□□□□□ -0.5
TOP3B-210ENST00000444502 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
TOP3B-210ENST00000444502 ANKRD65E5RJM6 399 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 DDX39AO00148 427 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 MYCLP12524 364 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 CCT6AP40227 531 aaKnown RBP11.9□□□□□ -0.5
TOP3B-210ENST00000444502 ZSCAN26Q16670 478 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
TOP3B-210ENST00000444502 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms