RNA–Protein interactions for RNA: ENST00000442522.6

CCDC66-208, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 2,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-208ENST00000442522 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 ZBTB43O43298 467 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 KIF5BP33176 963 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 APLP1P51693 650 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 RCAN1P53805 252 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 SPP2Q13103 211 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
CCDC66-208ENST00000442522 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
CCDC66-208ENST00000442522 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 ZNF654Q8IZM8 581 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 LRRC47Q8N1G4 583 aaKnown RBP11.3□□□□□ -0.6
CCDC66-208ENST00000442522 GMCL1P1Q8NEA9 526 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 ZNF274Q96GC6 653 aaPredicted RBP11.3□□□□□ -0.6
CCDC66-208ENST00000442522 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CCDC66-208ENST00000442522 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 CXCL11O14625 94 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-208ENST00000442522 BACE1P56817 501 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 BECN1Q14457 450 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 PPP2R5BQ15173 497 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-208ENST00000442522 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 LPAR1Q92633 364 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-208ENST00000442522 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.29□□□□□ -0.6
CCDC66-208ENST00000442522 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
CCDC66-208ENST00000442522 AFG3L2Q9Y4W6 797 aa11.29□□□□□ -0.6
CCDC66-208ENST00000442522 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 ECE1P42892 770 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 EVCP57679 992 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 MTMR2Q13614 643 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 ACER1Q8TDN7 264 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SNX21Q969T3 373 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 GOLGA8AA7E2F4 631 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 F5H6K3 240 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SLC1A4P43007 532 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 KLRC3Q07444 240 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 WNK4Q96J92 1243 aa11.28□□□□□ -0.6
CCDC66-208ENST00000442522 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
CCDC66-208ENST00000442522 A0A1W2PRG0 241 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 IRF6O14896 467 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 DEKP35659 375 aaKnown RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 GNAQP50148 359 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 GTF2A2P52657 109 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 CCDC96Q2M329 555 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 ASPRV1Q53RT3 343 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.6
CCDC66-208ENST00000442522 GMCL1Q96IK5 515 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 SENP2Q9HC62 589 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 BRPF3Q9ULD4 1205 aa11.27□□□□□ -0.6
CCDC66-208ENST00000442522 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
CCDC66-208ENST00000442522 HMGCS2P54868 508 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 TROAPQ12815 778 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 RTN1Q16799 776 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 FANCBQ8NB91 859 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CCDC66-208ENST00000442522 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
CCDC66-208ENST00000442522 PHIPQ8WWQ0 1821 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 K7ELQ4 463 aaPredicted RBP11.26□□□□□ -0.61
CCDC66-208ENST00000442522 CPLX1O14810 134 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
CCDC66-208ENST00000442522 NDUFB10O96000 172 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 PDHBP11177 359 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 CETPP11597 493 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 BMP3P12645 472 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
CCDC66-208ENST00000442522 STK3Q13188 491 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC66-208ENST00000442522 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
CCDC66-208ENST00000442522 SPICE1Q8N0Z3 855 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms