RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 ATP1A1P05023 1023 aaKnown RBP15.37■□□□□ 0.05
LINC02048-201ENST00000440556 MYBL2P10244 700 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 HSPD1P10809 573 aaKnown RBP15.37■□□□□ 0.05
LINC02048-201ENST00000440556 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 MED15Q96RN5 788 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 CENPHQ9H3R5 247 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 DBNLQ9UJU6 430 aaKnown RBP15.37■□□□□ 0.05
LINC02048-201ENST00000440556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.37■□□□□ 0.05
LINC02048-201ENST00000440556 ACEP12821 1306 aa15.37■□□□□ 0.05
LINC02048-201ENST00000440556 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 RWDD2BP57060 319 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 CUL4BQ13620 913 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 KRT40Q6A162 431 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 MYCBPAPQ8TBZ2 947 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 ZNF483Q8TF39 744 aaPredicted RBP15.36■□□□□ 0.05
LINC02048-201ENST00000440556 EDC3Q96F86 508 aaKnown RBP15.36■□□□□ 0.05
LINC02048-201ENST00000440556 TSGA10Q9BZW7 698 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 SERTAD1Q9UHV2 236 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 CEP131Q9UPN4 1083 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 PARP4Q9UKK3 1724 aaKnown RBP15.36■□□□□ 0.05
LINC02048-201ENST00000440556 GHRP10912 638 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 PTPREP23469 700 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
LINC02048-201ENST00000440556 XRCC4Q13426 336 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 CCDC122Q5T0U0 273 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 CRELD2Q6UXH1 353 aaPredicted RBP15.36■□□□□ 0.05
LINC02048-201ENST00000440556 MREGQ8N565 214 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 OR8K1Q8NGG5 319 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 FAM210AQ96ND0 272 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 ETAA1Q9NY74 926 aa15.36■□□□□ 0.05
LINC02048-201ENST00000440556 PRC1O43663 620 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 ABL1P00519 1130 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 KRT9P35527 623 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 CYLC1P35663 651 aaPredicted RBP15.35■□□□□ 0.05
LINC02048-201ENST00000440556 IFT88Q13099 833 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 NAA25Q14CX7 972 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 IMMTQ16891 758 aaKnown RBP15.35■□□□□ 0.05
LINC02048-201ENST00000440556 ARL8AQ96BM9 186 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 GSDMAQ96QA5 445 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 MYO5AQ9Y4I1 1855 aaKnown RBP15.35■□□□□ 0.05
LINC02048-201ENST00000440556 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
LINC02048-201ENST00000440556 N4BP3O15049 544 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 FOXN1O15353 648 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 POLR2DO15514 142 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 MGRN1O60291 552 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 DNAJC8O75937 253 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 NR1D1P20393 614 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 RBBP5Q15291 538 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 SPECC1Q5M775 1068 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 CFAP58Q5T655 872 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 NCOA7Q8NI08 942 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 WASF1Q92558 559 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 TATDN2Q93075 761 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 GDAP1L1Q96MZ0 367 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 SLC24A3Q9HC58 644 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 HDAC6Q9UBN7 1215 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 CPDO75976 1380 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 ECM29Q5VYK3 1845 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 LIN7AO14910 233 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 ACTN4O43707 911 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 IPO7O95373 1038 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 VAV2P52735 878 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 TRAF1Q13077 416 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 CAPZA3Q96KX2 299 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 RNPC3Q96LT9 517 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 RABEP2Q9H5N1 569 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 STIM2Q9P246 746 aa15.34■□□□□ 0.05
LINC02048-201ENST00000440556 FBXO2Q9UK22 296 aaPredicted RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 TPX2Q9ULW0 747 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 REXO2Q9Y3B8 237 aaKnown RBP15.34■□□□□ 0.05
LINC02048-201ENST00000440556 MST1RQ04912 1400 aa15.33■□□□□ 0.05
LINC02048-201ENST00000440556 ENC1O14682 589 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 ZMYND10O75800 440 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 GCKP35557 465 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 COPB1P53618 953 aaKnown RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 TTC19Q6DKK2 380 aaPredicted RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 IFT20Q8IY31 132 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 GSPT2Q8IYD1 628 aaKnown RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 IQCKQ8N0W5 287 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 ZIM3Q96PE6 472 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 PURBQ96QR8 312 aaKnown RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 KDM4CQ9H3R0 1056 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
LINC02048-201ENST00000440556 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
LINC02048-201ENST00000440556 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms