RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 NYAP2Q9P242 653 aa21.37■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L15C9J2P7 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L13C9JLJ4 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L11C9JVI0 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L18D6R9N7 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L22D6RA61 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L17D6RBQ6 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L19D6RCP7 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L20D6RJB6 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 RAD21O60216 631 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 NMT2O60551 498 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 PEX10O60683 326 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 HERVK_113P62684 666 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 USP17L24Q0WX57 530 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 IMMTQ16891 758 aaKnown RBP21.36■■□□□ 1.01
CPSF4-205ENST00000440514 LRRC47Q8N1G4 583 aaKnown RBP21.36■■□□□ 1.01
CPSF4-205ENST00000440514 TANGO6Q9C0B7 1094 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 CLIP2Q9UDT6 1046 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 CTNNA3Q9UI47 895 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 TRIM17Q9Y577 477 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
CPSF4-205ENST00000440514 A0A0G2JMZ2 1700 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 MGAMO43451 1857 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 CDC45O75419 566 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 CTGFP29279 349 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 CATSPERGQ6ZRH7 1159 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 MFSD6Q6ZSS7 791 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 OTOP1Q7RTM1 612 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 LPAR1Q92633 364 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 GOPCQ9HD26 462 aa21.35■■□□□ 1.01
CPSF4-205ENST00000440514 RLFQ13129 1914 aa21.34■■□□□ 1.01
CPSF4-205ENST00000440514 TTLL1O95922 423 aa21.34■■□□□ 1.01
CPSF4-205ENST00000440514 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
CPSF4-205ENST00000440514 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
CPSF4-205ENST00000440514 RNF41Q9H4P4 317 aaPredicted RBP21.34■■□□□ 1.01
CPSF4-205ENST00000440514 IL17RBQ9NRM6 502 aa21.34■■□□□ 1.01
CPSF4-205ENST00000440514 WDR46O15213 610 aaKnown RBP21.33■■□□□ 1.01
CPSF4-205ENST00000440514 PCP11498 1178 aaKnown RBP21.33■■□□□ 1.01
CPSF4-205ENST00000440514 KIF22Q14807 665 aa21.33■■□□□ 1.01
CPSF4-205ENST00000440514 POTEEQ6S8J3 1075 aa21.33■■□□□ 1.01
CPSF4-205ENST00000440514 EFCC1Q9HA90 598 aa21.33■■□□□ 1.01
CPSF4-205ENST00000440514 TXNRD2Q9NNW7 524 aa21.33■■□□□ 1.01
CPSF4-205ENST00000440514 U3KPZ7 1027 aaPredicted RBP21.33■■□□□ 1.01
CPSF4-205ENST00000440514 SPDYE16A6NNV3 312 aaPredicted RBP21.32■■□□□ 1
CPSF4-205ENST00000440514 NDUFB10O96000 172 aa21.32■■□□□ 1
CPSF4-205ENST00000440514 TRIM47Q96LD4 638 aa21.32■■□□□ 1
CPSF4-205ENST00000440514 NUP88Q99567 741 aaPredicted RBP21.32■■□□□ 1
CPSF4-205ENST00000440514 PAGR1Q9BTK6 254 aa21.32■■□□□ 1
CPSF4-205ENST00000440514 LSG1Q9H089 658 aaKnown RBP21.32■■□□□ 1
CPSF4-205ENST00000440514 STX8Q9UNK0 236 aa21.32■■□□□ 1
CPSF4-205ENST00000440514 RBM8AQ9Y5S9 174 aaKnown RBP21.32■■□□□ 1
CPSF4-205ENST00000440514 TAF6LQ9Y6J9 622 aa21.32■■□□□ 1
CPSF4-205ENST00000440514 CYP21A2P08686 494 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 PSMC4P43686 418 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 FAM83BQ5T0W9 1011 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 KIAA1211Q6ZU35 1233 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 MKL1Q969V6 931 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 ANO2Q9NQ90 1003 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 RBPJLQ9UBG7 517 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
CPSF4-205ENST00000440514 B4E1Z4 1266 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 F5H6K3 240 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 KDM4AO75164 1064 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 FLOT1O75955 427 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 KLRC3Q07444 240 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 SAMD1Q6SPF0 538 aaPredicted RBP21.3■■□□□ 1
CPSF4-205ENST00000440514 CASC1Q6TDU7 716 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 RASGRP2Q7LDG7 609 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 ESR2Q92731 530 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 MAP4K1Q92918 833 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 FBXO28Q9NVF7 368 aa21.3■■□□□ 1
CPSF4-205ENST00000440514 CNMDO75829 334 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
CPSF4-205ENST00000440514 FCGRTP55899 365 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 GTF3C2Q8WUA4 911 aaPredicted RBP21.29■■□□□ 1
CPSF4-205ENST00000440514 CHMP4CQ96CF2 233 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 ABHD8Q96I13 439 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 ZKSCAN3Q9BRR0 538 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 SYNPO2Q9UMS6 1093 aa21.29■■□□□ 1
CPSF4-205ENST00000440514 NOVP48745 357 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 ERVK-9P63128 1117 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 ERVK-24P63145 666 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 COG2Q14746 738 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 PKN2Q16513 984 aaKnown RBP21.28■■□□□ 1
CPSF4-205ENST00000440514 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 FBXO46Q6PJ61 603 aaPredicted RBP21.28■■□□□ 1
CPSF4-205ENST00000440514 LBX2Q6XYB7 198 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 GMCL1P1Q8NEA9 526 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 ATG4CQ96DT6 458 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 BTBD7Q9P203 1132 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 PTPN22Q9Y2R2 807 aa21.28■■□□□ 1
CPSF4-205ENST00000440514 COL11A1P12107 1806 aaPredicted RBP21.27■■□□□ 1
CPSF4-205ENST00000440514 TNPO2O14787 897 aaKnown RBP21.27■■□□□ 1
CPSF4-205ENST00000440514 DSG3P32926 999 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 ARHGEF6Q15052 776 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 SLFN13Q68D06 897 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 STOX1Q6ZVD7 989 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 GPRC5AQ8NFJ5 357 aa21.27■■□□□ 1
CPSF4-205ENST00000440514 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms