RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 COG2Q14746 738 aa24.37■■□□□ 1.49
NCKIPSD-206ENST00000439518 LPAR1Q92633 364 aa24.37■■□□□ 1.49
NCKIPSD-206ENST00000439518 ARHGEF10LQ9HCE6 1279 aa24.37■■□□□ 1.49
NCKIPSD-206ENST00000439518 HMX1Q9NP08 348 aaPredicted RBP24.37■■□□□ 1.49
NCKIPSD-206ENST00000439518 MYH8P13535 1937 aa24.37■■□□□ 1.49
NCKIPSD-206ENST00000439518 H0YGN5 161 aa24.36■■□□□ 1.49
NCKIPSD-206ENST00000439518 ERC2O15083 957 aa24.36■■□□□ 1.49
NCKIPSD-206ENST00000439518 RGS2P41220 211 aa24.36■■□□□ 1.49
NCKIPSD-206ENST00000439518 TRMT44Q8IYL2 757 aaKnown RBP24.36■■□□□ 1.49
NCKIPSD-206ENST00000439518 HOXC10Q9NYD6 342 aa24.36■■□□□ 1.49
NCKIPSD-206ENST00000439518 GPAA1O43292 621 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 GLRX3O76003 335 aaKnown RBP24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 HTATIP2Q9BUP3 242 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 TANGO6Q9C0B7 1094 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 SH2D4AQ9H788 454 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 VCPKMTQ9H867 229 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
NCKIPSD-206ENST00000439518 RLFQ13129 1914 aa24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 ZKSCAN1P17029 563 aaPredicted RBP24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 MAP2K5Q13163 448 aa24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 DPF3Q92784 378 aa24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 APBA2Q99767 749 aa24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 KANSL2Q9H9L4 492 aa24.34■■□□□ 1.49
NCKIPSD-206ENST00000439518 ROBO3Q96MS0 1386 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 SLC15A5A6NIM6 579 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 M0R2C6 588 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 EEF2P13639 858 aaKnown RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 PRKAR2AP13861 404 aaKnown RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 GNAT2P19087 354 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 MX1P20591 662 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 PTPREP23469 700 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 CCL14Q16627 93 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 LRRFIP1Q32MZ4 808 aaKnown RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 HABP4Q5JVS0 413 aaKnown RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 SPICE1Q8N0Z3 855 aa24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 CWC22Q9HCG8 908 aaKnown RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 EPB41L4AQ9HCS5 686 aaPredicted RBP24.33■■□□□ 1.49
NCKIPSD-206ENST00000439518 HDAC1Q13547 482 aaPredicted RBP24.32■■□□□ 1.48
NCKIPSD-206ENST00000439518 RASA1P20936 1047 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 DSG3P32926 999 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 CACNB2Q08289 660 aaPredicted RBP24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 GRB14Q14449 540 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 WDR78Q5VTH9 848 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 MB21D1Q8N884 522 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 ANKLE1Q8NAG6 615 aa24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 YTHDC1Q96MU7 727 aaKnown RBP24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 MOV10L1Q9BXT6 1211 aaKnown RBP24.31■■□□□ 1.48
NCKIPSD-206ENST00000439518 A0A0G2JMZ2 1700 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 MINDY4BA8MYZ0 360 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 PATL2C9JE40 543 aaKnown RBP24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 WDR46O15213 610 aaKnown RBP24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 HOXC6P09630 235 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 ANKRD45Q5TZF3 282 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 PAWRQ96IZ0 340 aaKnown RBP24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 SPATC1LQ9H0A9 340 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 OGDHLQ9ULD0 1010 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 IVNS1ABPQ9Y6Y0 642 aa24.3■■□□□ 1.48
NCKIPSD-206ENST00000439518 FLOT1O75955 427 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 ATP2B2Q01814 1243 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 ZMYM1Q5SVZ6 1142 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 SHCBP1Q8NEM2 672 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 DIS3LQ8TF46 1054 aaKnown RBP24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 ATG4CQ96DT6 458 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 SEC62Q99442 399 aaKnown RBP24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 FSD1Q9BTV5 496 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 MKNK2Q9HBH9 465 aa24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 COLQQ9Y215 455 aaPredicted RBP24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 GREB1LQ9C091 1923 aaPredicted RBP24.29■■□□□ 1.48
NCKIPSD-206ENST00000439518 TDO2P48775 406 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 MNX1P50219 401 aaPredicted RBP24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 NECAB2Q7Z6G3 386 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 IFNL3Q8IZI9 196 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 FLRT1Q9NZU1 646 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 STAP2Q9UGK3 403 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 TRIOBPQ9H2D6 2365 aa24.28■■□□□ 1.48
NCKIPSD-206ENST00000439518 STRNO43815 780 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 IGHA2P01877 340 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 APPP05067 770 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 STK11IPQ8N1F8 1099 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 GOPCQ9HD26 462 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 ADAMTS5Q9UNA0 930 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 NR2E3Q9Y5X4 410 aa24.27■■□□□ 1.48
NCKIPSD-206ENST00000439518 ERCC3P19447 782 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 CCND3P30281 292 aaPredicted RBP24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 AAMPQ13685 434 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 LHX8Q68G74 356 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 NPLOC4Q8TAT6 608 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 FBXO28Q9NVF7 368 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 NYAP2Q9P242 653 aa24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
NCKIPSD-206ENST00000439518 IGKV6D-41A0A0C4DH26 115 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 MFSD14CQ5VZR4 134 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 NACAP1Q9BZK3 213 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 NBPF3Q9H094 633 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 MROH8Q9H579 483 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 PARP14Q460N5 1801 aa24.25■■□□□ 1.47
NCKIPSD-206ENST00000439518 RANBP2P49792 3224 aaKnown RBP24.24■■□□□ 1.47
NCKIPSD-206ENST00000439518 ZNF236Q9UL36 1845 aa24.24■■□□□ 1.47
NCKIPSD-206ENST00000439518 ADORA2AP29274 412 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms