RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 GREB1LQ9C091 1923 aaPredicted RBP17.29■□□□□ 0.36
ATAD3A-206ENST00000439513 TTC41PQ6P2S7 1318 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 ALPK3Q96L96 1907 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 M0R2C6 588 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 RGS2P41220 211 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 CCAR1Q8IX12 1150 aaKnown RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 SPICE1Q8N0Z3 855 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 DPF3Q92784 378 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 APBA2Q99767 749 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 ARPP21Q9UBL0 812 aaPredicted RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 COLQQ9Y215 455 aaPredicted RBP17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 TRIOBPQ9H2D6 2365 aa17.28■□□□□ 0.36
ATAD3A-206ENST00000439513 GPAA1O43292 621 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 ZKSCAN1P17029 563 aaPredicted RBP17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 PTPREP23469 700 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 CCNA1P78396 465 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 MAP2K5Q13163 448 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 COG2Q14746 738 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 PAWRQ96IZ0 340 aaKnown RBP17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 HTATIP2Q9BUP3 242 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 FLRT1Q9NZU1 646 aa17.27■□□□□ 0.36
ATAD3A-206ENST00000439513 ROBO3Q96MS0 1386 aa17.27■□□□□ 0.35
ATAD3A-206ENST00000439513 EEF2P13639 858 aaKnown RBP17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 GRB14Q14449 540 aa17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 LPAR1Q92633 364 aa17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 SEC62Q99442 399 aaKnown RBP17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 SZT2Q5T011 3432 aa17.26■□□□□ 0.35
ATAD3A-206ENST00000439513 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 ZFYP08048 801 aaPredicted RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 CAPN2P17655 700 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 RASA1P20936 1047 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 DSG3P32926 999 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 NPLOC4Q8TAT6 608 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 ATG4CQ96DT6 458 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 MOV10L1Q9BXT6 1211 aaKnown RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 HOXC10Q9NYD6 342 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 OGDHLQ9ULD0 1010 aa17.25■□□□□ 0.35
ATAD3A-206ENST00000439513 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 ERC2O15083 957 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 FLOT1O75955 427 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 IGHA2P01877 340 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 HOXC6P09630 235 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 MX1P20591 662 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 ZNF236Q9UL36 1845 aa17.24■□□□□ 0.35
ATAD3A-206ENST00000439513 WDR46O15213 610 aaKnown RBP17.23■□□□□ 0.35
ATAD3A-206ENST00000439513 ATP2B2Q01814 1243 aa17.23■□□□□ 0.35
ATAD3A-206ENST00000439513 LHX8Q68G74 356 aa17.23■□□□□ 0.35
ATAD3A-206ENST00000439513 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
ATAD3A-206ENST00000439513 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
ATAD3A-206ENST00000439513 COL11A1P12107 1806 aaPredicted RBP17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 LAMA3Q16787 3333 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 ERCC3P19447 782 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 HDAC1Q13547 482 aaPredicted RBP17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 ZMYM1Q5SVZ6 1142 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 SHCBP1Q8NEM2 672 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
ATAD3A-206ENST00000439513 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 FOXP2O15409 715 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 PRDM1O75626 825 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 GNAT2P19087 354 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 ADORA2AP29274 412 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 TDO2P48775 406 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
ATAD3A-206ENST00000439513 PFASO15067 1338 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms