RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CEP112Q8N8E3 955 aa9.74□□□□□ -0.85
HPS4-206ENST00000439453 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
HPS4-206ENST00000439453 MSANTD4Q8NCY6 345 aa9.74□□□□□ -0.85
HPS4-206ENST00000439453 TBC1D16Q8TBP0 767 aa9.74□□□□□ -0.85
HPS4-206ENST00000439453 PNKPQ96T60 521 aa9.74□□□□□ -0.85
HPS4-206ENST00000439453 IRX2Q9BZI1 471 aaPredicted RBP9.74□□□□□ -0.85
HPS4-206ENST00000439453 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 POTECB2RU33 542 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 FZD9O00144 591 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 KLRK1P26718 216 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 PDE4BQ07343 736 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 SHC4Q6S5L8 630 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 FBXL16Q8N461 479 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 ABCB6Q9NP58 842 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 EIF3CLB5ME19 914 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 GOLIM4O00461 696 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 AOC3Q16853 763 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 ZMYM1Q5SVZ6 1142 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 METTL16Q86W50 562 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 EIF3CQ99613 913 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 CDC23Q9UJX2 597 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 RIPOR2Q9Y4F9 1068 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 DCAF8L1A6NGE4 600 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 CCDC175P0C221 793 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 MTF1Q14872 753 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 GRIPAP1Q4V328 841 aa9.73□□□□□ -0.85
HPS4-206ENST00000439453 CDC5LQ99459 802 aaKnown RBP9.73□□□□□ -0.85
HPS4-206ENST00000439453 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 SNAP23O00161 211 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 CDC27P30260 824 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 TTLL5Q6EMB2 1281 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 ATG9AQ7Z3C6 839 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 FOXP4Q8IVH2 680 aaPredicted RBP9.72□□□□□ -0.85
HPS4-206ENST00000439453 SUGCTQ9HAC7 445 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 PCDHA5Q9Y5H7 936 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 FAM237AA0A1B0GTK4 181 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 GOLGA8BA8MQT2 603 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 PPP6R2O75170 966 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 LRRC24Q50LG9 513 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 TXNRD3Q86VQ6 643 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 LZTFL1Q9NQ48 299 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 AKAP2Q9Y2D5 859 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 ANKRD18BA2A2Z9 1011 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 CPLX1O14810 134 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 BMP6P22004 513 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 CHRNDQ07001 517 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 LONRF3Q496Y0 759 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 RESP18Q5W5W9 173 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 WWC2Q6AWC2 1192 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 LRRC31Q6UY01 552 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 DPP8Q6V1X1 898 aaPredicted RBP9.72□□□□□ -0.85
HPS4-206ENST00000439453 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 FAM71BQ8TC56 605 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
HPS4-206ENST00000439453 GEMIN8Q9NWZ8 242 aaKnown RBP9.72□□□□□ -0.85
HPS4-206ENST00000439453 KIF5CO60282 957 aa9.71□□□□□ -0.85
HPS4-206ENST00000439453 IFIT5Q13325 482 aaKnown RBP9.71□□□□□ -0.85
HPS4-206ENST00000439453 CNNM3Q8NE01 707 aa9.71□□□□□ -0.85
HPS4-206ENST00000439453 MAST3O60307 1309 aa9.71□□□□□ -0.85
HPS4-206ENST00000439453 XDHP47989 1333 aa9.71□□□□□ -0.85
HPS4-206ENST00000439453 SOWAHDA6NJG2 315 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 ZNF18P17022 549 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 CORO7P57737 925 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 TUBB4BP68371 445 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 TUBB2AQ13885 445 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 CASP8Q14790 479 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 PTPAQ15257 358 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 CCDC102AQ96A19 550 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 CLIC6Q96NY7 704 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 TUBB2BQ9BVA1 445 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 VPS33BQ9H267 617 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 RAI14Q9P0K7 980 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 NFE2L3Q9Y4A8 694 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 GUCY2CP25092 1073 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 RGS22Q8NE09 1264 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 PPM1EQ8WY54 764 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
HPS4-206ENST00000439453 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
HPS4-206ENST00000439453 PRC1O43663 620 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 RHOXF2BP0C7M4 288 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.86
HPS4-206ENST00000439453 PANX2Q96RD6 677 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 RHOXF2Q9BQY4 288 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 GBP3Q9H0R5 595 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 KCNQ5Q9NR82 932 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 KCNH3Q9ULD8 1083 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 CEP350Q5VT06 3117 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 A0A0U1RQJ8 604 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms