RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TROAPQ12815 778 aa24.17■■□□□ 1.46
CHD3-204ENST00000439235 CCDC83Q8IWF9 413 aa24.17■■□□□ 1.46
CHD3-204ENST00000439235 ANKRD13AQ8IZ07 590 aa24.17■■□□□ 1.46
CHD3-204ENST00000439235 NECAB1Q8N987 351 aa24.17■■□□□ 1.46
CHD3-204ENST00000439235 CTCFLQ8NI51 663 aaPredicted RBP24.17■■□□□ 1.46
CHD3-204ENST00000439235 CCDC196A0A1B0GTZ2 297 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 UNCXA6NJT0 531 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 KIF5BP33176 963 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 CCT2P78371 535 aaKnown RBP24.16■■□□□ 1.46
CHD3-204ENST00000439235 SCRN1Q12765 414 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 VGLL4Q14135 290 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 RTN1Q16799 776 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 RAB11FIP4Q86YS3 637 aa24.16■■□□□ 1.46
CHD3-204ENST00000439235 RBM28Q9NW13 759 aaKnown RBP24.16■■□□□ 1.46
CHD3-204ENST00000439235 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.16■■□□□ 1.46
CHD3-204ENST00000439235 ITGBL1O95965 494 aaPredicted RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 PTPRAP18433 802 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 RXRAP19793 462 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 CPLX2Q6PUV4 134 aaKnown RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 SIAH1Q8IUQ4 282 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 FANCBQ8NB91 859 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 GMCL1P1Q8NEA9 526 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 INTS4Q96HW7 963 aaKnown RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 FEZ1Q99689 392 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 GBA2Q9HCG7 927 aaPredicted RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.15■■□□□ 1.46
CHD3-204ENST00000439235 TMX2Q9Y320 296 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 SNCAIPQ9Y6H5 919 aa24.15■■□□□ 1.46
CHD3-204ENST00000439235 CPLX1O14810 134 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 CELF2O95319 508 aaKnown RBP24.14■■□□□ 1.45
CHD3-204ENST00000439235 GRM4Q14833 912 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 CCDC144CPQ8IYA2 1237 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 C2orf69Q8N8R5 385 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 WDR18Q9BV38 432 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 GOPCQ9HD26 462 aa24.14■■□□□ 1.45
CHD3-204ENST00000439235 CDKL5O76039 1030 aa24.13■■□□□ 1.45
CHD3-204ENST00000439235 FMR1Q06787 632 aaKnown RBP eCLIP24.13■■□□□ 1.45
CHD3-204ENST00000439235 ST3GAL1Q11201 340 aa24.13■■□□□ 1.45
CHD3-204ENST00000439235 LLPHQ9BRT6 129 aaKnown RBP24.13■■□□□ 1.45
CHD3-204ENST00000439235 NCOA5Q9HCD5 579 aaKnown RBP24.13■■□□□ 1.45
CHD3-204ENST00000439235 OTOFQ9HC10 1997 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 A0A1W2PRG0 241 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 ECE1P42892 770 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 SLC4A3P48751 1232 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 GNAQP50148 359 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 MOB2Q70IA6 237 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 CCDC84Q86UT8 332 aaPredicted RBP24.12■■□□□ 1.45
CHD3-204ENST00000439235 RBM46Q8TBY0 533 aaKnown RBP24.12■■□□□ 1.45
CHD3-204ENST00000439235 ACER1Q8TDN7 264 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 DCAF4Q8WV16 495 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 MTMR7Q9Y216 660 aa24.12■■□□□ 1.45
CHD3-204ENST00000439235 PARP1P09874 1014 aaKnown RBP24.11■■□□□ 1.45
CHD3-204ENST00000439235 SNHG28P0DPA3 235 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 PDHBP11177 359 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 ASPRV1Q53RT3 343 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 LDLRAD1Q5T700 205 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 SLFN13Q68D06 897 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 ZNF280CQ8ND82 737 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 KIAA1683Q9H0B3 1180 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 VCPKMTQ9H867 229 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 ZHX2Q9Y6X8 837 aa24.11■■□□□ 1.45
CHD3-204ENST00000439235 MYH4Q9Y623 1939 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 F5H6K3 240 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 UBE2Q2LH0YL09 131 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 TOMM70O94826 608 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 CDC27P30260 824 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 USP14P54578 494 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 KLRC3Q07444 240 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 GPATCH4Q5T3I0 446 aaKnown RBP24.1■■□□□ 1.45
CHD3-204ENST00000439235 GMCL1Q96IK5 515 aa24.1■■□□□ 1.45
CHD3-204ENST00000439235 FAM217BQ9NTX9 383 aaPredicted RBP24.1■■□□□ 1.45
CHD3-204ENST00000439235 USP17L10C9JJH3 530 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 RAD21O60216 631 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 NDUFB10O96000 172 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 ADD1P35611 737 aaKnown RBP24.09■■□□□ 1.45
CHD3-204ENST00000439235 SLC1A4P43007 532 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 CCDC96Q2M329 555 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 TMTC3Q6ZXV5 915 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 ERO1BQ86YB8 467 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 LZTS2Q9BRK4 669 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 ELP3Q9H9T3 547 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 FOXD4L1Q9NU39 408 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 SMC3Q9UQE7 1217 aa24.09■■□□□ 1.45
CHD3-204ENST00000439235 PALM3A6NDB9 673 aaPredicted RBP24.08■■□□□ 1.45
CHD3-204ENST00000439235 SPDYE5A6NIY4 337 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 HMGN5P82970 282 aaKnown RBP24.08■■□□□ 1.45
CHD3-204ENST00000439235 PPATQ06203 517 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 SPP2Q13103 211 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 SPRYD3Q8NCJ5 442 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 NSUN7Q8NE18 718 aaKnown RBP24.08■■□□□ 1.45
CHD3-204ENST00000439235 LPAR1Q92633 364 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 MAD2L2Q9UI95 211 aa24.08■■□□□ 1.45
CHD3-204ENST00000439235 PASKQ96RG2 1323 aa24.08■■□□□ 1.44
CHD3-204ENST00000439235 PTPDC1A2A3K4 754 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 C19orf81C9J6K1 198 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 IFNAR1P17181 557 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 ZNF543Q08ER8 600 aa24.07■■□□□ 1.44
CHD3-204ENST00000439235 MTMR2Q13614 643 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms