RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 COMMD10Q9Y6G5 202 aa16.63■□□□□ 0.25
TSC2-206ENST00000439117 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
TSC2-206ENST00000439117 TERF2Q15554 542 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 TCHPQ9BT92 498 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 LARSQ9P2J5 1176 aaKnown RBP16.62■□□□□ 0.25
TSC2-206ENST00000439117 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 SLF1Q9BQI6 1058 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 B4DLN1 442 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
TSC2-206ENST00000439117 CTNND2Q9UQB3 1225 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
TSC2-206ENST00000439117 TMEM110-MUSTN1A8MSY1 372 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
TSC2-206ENST00000439117 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
TSC2-206ENST00000439117 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 HS2ST1Q7LGA3 356 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 HOMER3Q9NSC5 361 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 TXNDC16Q9P2K2 825 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
TSC2-206ENST00000439117 IRX4P78413 519 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 TRIM4Q9C037 500 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 DEXIO95424 95 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 PDE6BP35913 854 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 PAK1Q13153 545 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 RAPGEF1Q13905 1077 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 PLS1Q14651 629 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 RGS22Q8NE09 1264 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 MCM7P33993 719 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 INF2Q27J81 1249 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 MCTP2Q6DN12 878 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 KLHL14Q9P2G3 628 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
TSC2-206ENST00000439117 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
TSC2-206ENST00000439117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
TSC2-206ENST00000439117 CCDC151A5D8V7 595 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 CDC25BP30305 580 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 PLCD1P51178 756 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 ANKRD20A3Q5VUR7 823 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 TRIM58Q8NG06 486 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 HNRNPH2P55795 449 aaKnown RBP16.6■□□□□ 0.25
TSC2-206ENST00000439117 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 SDCCAG8Q86SQ7 713 aaPredicted RBP16.6■□□□□ 0.25
TSC2-206ENST00000439117 EDC3Q96F86 508 aaKnown RBP16.6■□□□□ 0.25
TSC2-206ENST00000439117 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 GDAP1L1Q96MZ0 367 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
TSC2-206ENST00000439117 CEP104O60308 925 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 HHATQ5VTY9 493 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 STK38LQ9Y2H1 464 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 SPATA31A3Q5VYP0 1347 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 NUF2Q9BZD4 464 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 HAUS4Q9H6D7 363 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
TSC2-206ENST00000439117 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 RAB17Q9H0T7 212 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 CTNNA1P35221 906 aaKnown RBP16.59■□□□□ 0.25
TSC2-206ENST00000439117 RPS6KA1Q15418 735 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 KLHL7Q8IXQ5 586 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 GPCPD1Q9NPB8 672 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 CDC23Q9UJX2 597 aa16.59■□□□□ 0.25
TSC2-206ENST00000439117 RGS16O15492 202 aaPredicted RBP16.58■□□□□ 0.25
TSC2-206ENST00000439117 MAGEA9P43362 315 aa16.58■□□□□ 0.25
TSC2-206ENST00000439117 EIF6P56537 245 aaKnown RBP16.58■□□□□ 0.25
TSC2-206ENST00000439117 DENND2CQ68D51 928 aa16.58■□□□□ 0.25
TSC2-206ENST00000439117 TDRD7Q8NHU6 1098 aaKnown RBP16.58■□□□□ 0.25
TSC2-206ENST00000439117 PARP2Q9UGN5 583 aa16.58■□□□□ 0.25
TSC2-206ENST00000439117 CLTCL1P53675 1640 aa16.58■□□□□ 0.25
TSC2-206ENST00000439117 ERCC5P28715 1186 aaPredicted RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 TRIM68Q6AZZ1 485 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 SYNCQ9H7C4 482 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 BCAP29Q9UHQ4 241 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 TXNDC9O14530 226 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 SMIM24O75264 130 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 CLTAP09496 248 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 LRRC24Q50LG9 513 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 ADALQ6DHV7 355 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 SUDS3Q9H7L9 328 aaPredicted RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 NCOA5Q9HCD5 579 aaKnown RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 MYO1CO00159 1063 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 POLR2DO15514 142 aaKnown RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 STX10O60499 249 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 TCP1P17987 556 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms