RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EGR3Q06889 387 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 RELL1Q8IUW5 271 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 LRRC56Q8IYG6 542 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 ZSCAN18Q8TBC5 510 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 RNF141Q8WVD5 230 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 KCNK12Q9HB15 430 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 DCP1AQ9NPI6 582 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 PRR36Q9H6K5 1346 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 SORBS3O60504 671 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 LRRN2O75325 713 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 LTKP29376 864 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 GBP2P32456 591 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 TRHRP34981 398 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 FBXO33Q7Z6M2 555 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 C1QL4Q86Z23 238 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 RHOVQ96L33 236 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 RSRP1Q9BUV0 290 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 REV1Q9UBZ9 1251 aa5.34□□□□□ -1.55
HMGB1P18-201ENST00000438801 MED1Q15648 1581 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 ZGLP1P0C6A0 271 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 TMEM253P0C7T8 217 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 TNNI2P48788 182 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 FAM160A1Q05DH4 1040 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 PWP1Q13610 501 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 PDZD8Q8NEN9 1154 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 BAHD1Q8TBE0 780 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 CCDC74BQ96LY2 380 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 SP110Q9HB58 689 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 KLHL3Q9UH77 587 aa5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 POLR3KQ9Y2Y1 108 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P18-201ENST00000438801 MINDY4BA8MYZ0 360 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 GRIN3BO60391 1043 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 HTR3BO95264 441 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 PDIA4P13667 645 aaKnown RBP5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 TAGLNQ01995 201 aaKnown RBP5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 SNAP47Q5SQN1 464 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 LCNL1Q6ZST4 164 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 OXR1Q8N573 874 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 GOLM1Q8NBJ4 401 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 DHX38Q92620 1227 aaKnown RBP5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 SYTL4Q96C24 671 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 KREMEN1Q96MU8 473 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 ASPNQ9BXN1 380 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 RNF32Q9H0A6 362 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 C19orf44Q9H6X5 657 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 VTI1BQ9UEU0 232 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 PCDHA11Q9Y5I1 949 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 KDM6BO15054 1643 aa5.32□□□□□ -1.56
HMGB1P18-201ENST00000438801 RBM47A0AV96 593 aaKnown RBP5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 FITM1A5D6W6 292 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 NPIPB6E9PJ23 425 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 ETV2O00321 342 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 ZSCAN22P10073 491 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 MPP2Q14168 576 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 ATG14Q6ZNE5 492 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 REC114Q7Z4M0 266 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 SIAH1Q8IUQ4 282 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 PHACTR4Q8IZ21 702 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 LILRA2Q8N149 483 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 SLC26A8Q96RN1 970 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 CD320Q9NPF0 282 aa5.31□□□□□ -1.56
HMGB1P18-201ENST00000438801 SHISA3A0PJX4 238 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 TCAF2A6NFQ2 919 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 DNAJA2O60884 412 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 GLDCP23378 1020 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 NR0B2Q15466 257 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 KCNA10Q16322 511 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 CLEC16AQ2KHT3 1053 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 TIGD5Q53EQ6 642 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 FAM196AQ6ZSG2 479 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 FBXO27Q8NI29 283 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 KCNN1Q92952 543 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 KIF2CQ99661 725 aa5.3□□□□□ -1.56
HMGB1P18-201ENST00000438801 GARTP22102 1010 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 GBP1P32455 592 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 ITGAEP38570 1179 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 CHMP4BP1P59074 171 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 TEKQ02763 1124 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 IRF2BP1Q8IU81 584 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 SLC6A17Q9H1V8 727 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 CWC22Q9HCG8 908 aaKnown RBP5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 KBTBD4Q9NVX7 518 aa5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 SMG5Q9UPR3 1016 aaKnown RBP5.29□□□□□ -1.56
HMGB1P18-201ENST00000438801 RGS13O14921 159 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 TLR3O15455 904 aaKnown RBP5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 ERCC3P19447 782 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 CHRNEQ04844 493 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 DUSP4Q13115 394 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 MLECQ14165 292 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 SPPL2CQ8IUH8 684 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 VWCEQ96DN2 955 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 ASCC2Q9H1I8 757 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 GPR160Q9UJ42 338 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms