RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 TMEM47Q9BQJ4 181 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 VCPKMTQ9H867 229 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 LY9Q9HBG7 655 aa21.57■■□□□ 1.04
HDAC6-208ENST00000438518 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.57■■□□□ 1.04
HDAC6-208ENST00000438518 CCDC69A6NI79 296 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 TRIM75PA6NK02 468 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 ST18O60284 1047 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 HSPA6P17066 643 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 NEK4P51957 841 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 RCAN1P53805 252 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 FASTKD5Q7L8L6 764 aaKnown RBP21.56■■□□□ 1.04
HDAC6-208ENST00000438518 CLEC10AQ8IUN9 316 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
HDAC6-208ENST00000438518 PNMA1Q8ND90 353 aa21.56■■□□□ 1.04
HDAC6-208ENST00000438518 A0A0G2JLL6 359 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-208ENST00000438518 A0A1W2PRG0 241 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 CALM1P0DP23 149 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 CALM2P0DP24 149 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 CALM3P0DP25 149 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 INHBEP58166 350 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 MTMR2Q13614 643 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 SYNE3Q6ZMZ3 975 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 PRRT2Q7Z6L0 340 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-208ENST00000438518 CATIPQ7Z7H3 387 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 CCDC84Q86UT8 332 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-208ENST00000438518 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-208ENST00000438518 ACER1Q8TDN7 264 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 TMOD4Q9NZQ9 345 aa21.55■■□□□ 1.04
HDAC6-208ENST00000438518 MANSC4A6NHS7 340 aaPredicted RBP21.54■■□□□ 1.04
HDAC6-208ENST00000438518 F5H6K3 240 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 DDAH1O94760 285 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 CETPP11597 493 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 CPA1P15085 419 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 EVCP57679 992 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 KLRC3Q07444 240 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 NOGQ13253 232 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
HDAC6-208ENST00000438518 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 CNKSR2Q8WXI2 1034 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 THSD7BQ9C0I4 1608 aa21.54■■□□□ 1.04
HDAC6-208ENST00000438518 FAM155AB1AL88 458 aaPredicted RBP21.53■■□□□ 1.04
HDAC6-208ENST00000438518 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
HDAC6-208ENST00000438518 GJA5P36382 358 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 MCM2P49736 904 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 LRRC47Q8N1G4 583 aaKnown RBP21.53■■□□□ 1.04
HDAC6-208ENST00000438518 DCAF4Q8WV16 495 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 GMCL1Q96IK5 515 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 TCEANC2Q96MN5 208 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 LRRC2Q9BYS8 371 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 SLC12A7Q9Y666 1083 aa21.53■■□□□ 1.04
HDAC6-208ENST00000438518 TESPA1A2RU30 521 aaPredicted RBP21.52■■□□□ 1.04
HDAC6-208ENST00000438518 SNHG28P0DPA3 235 aa21.52■■□□□ 1.04
HDAC6-208ENST00000438518 PPP2R5BQ15173 497 aa21.52■■□□□ 1.04
HDAC6-208ENST00000438518 PAXIP1Q6ZW49 1069 aaPredicted RBP21.52■■□□□ 1.04
HDAC6-208ENST00000438518 ZNF654Q8IZM8 581 aa21.52■■□□□ 1.04
HDAC6-208ENST00000438518 BRF1Q92994 677 aa21.52■■□□□ 1.04
HDAC6-208ENST00000438518 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
HDAC6-208ENST00000438518 HMGCS2P54868 508 aa21.51■■□□□ 1.03
HDAC6-208ENST00000438518 SREBF2Q12772 1141 aa21.51■■□□□ 1.03
HDAC6-208ENST00000438518 PABPC4Q13310 644 aaKnown RBP eCLIP21.51■■□□□ 1.03
HDAC6-208ENST00000438518 TOB2Q14106 344 aaPredicted RBP21.51■■□□□ 1.03
HDAC6-208ENST00000438518 SLFN13Q68D06 897 aa21.51■■□□□ 1.03
HDAC6-208ENST00000438518 MS4A4AQ96JQ5 239 aa21.51■■□□□ 1.03
HDAC6-208ENST00000438518 ZCCHC17Q9NP64 241 aaKnown RBP21.51■■□□□ 1.03
HDAC6-208ENST00000438518 NID2Q14112 1375 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 NDUFB10O96000 172 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 PDHBP11177 359 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 AK2P54819 239 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 TROAPQ12815 778 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 GPATCH4Q5T3I0 446 aaKnown RBP21.5■■□□□ 1.03
HDAC6-208ENST00000438518 CYP4F22Q6NT55 531 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 APOA5Q6Q788 366 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 ZNF274Q96GC6 653 aaPredicted RBP21.5■■□□□ 1.03
HDAC6-208ENST00000438518 CAPNS2Q96L46 248 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 EMILIN3Q9NT22 766 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 SLC45A1Q9Y2W3 748 aa21.5■■□□□ 1.03
HDAC6-208ENST00000438518 KLF18A0A0U1RQI7 1052 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 ZBTB43O43298 467 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 VCAM1P19320 739 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 KIF5BP33176 963 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 SLC1A4P43007 532 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 ZYXQ15942 572 aaKnown RBP21.49■■□□□ 1.03
HDAC6-208ENST00000438518 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 GPHNQ9NQX3 736 aaPredicted RBP21.49■■□□□ 1.03
HDAC6-208ENST00000438518 AGTPBP1Q9UPW5 1226 aa21.49■■□□□ 1.03
HDAC6-208ENST00000438518 CCL15-CCL14A0A0B4J2E2 113 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 PLA2G6O60733 806 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 BMP3P12645 472 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 MAP2K2P36507 400 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 CCL15Q16663 113 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 CTCFLQ8NI51 663 aaPredicted RBP21.48■■□□□ 1.03
HDAC6-208ENST00000438518 CHMP4CQ96CF2 233 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 SENP2Q9HC62 589 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 RBM28Q9NW13 759 aaKnown RBP21.48■■□□□ 1.03
HDAC6-208ENST00000438518 MYPNQ86TC9 1320 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 PARP14Q460N5 1801 aa21.48■■□□□ 1.03
HDAC6-208ENST00000438518 CCDC196A0A1B0GTZ2 297 aa21.47■■□□□ 1.03
HDAC6-208ENST00000438518 PARP1P09874 1014 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms