RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 NTRK3Q16288 839 aa14□□□□□ -0.17
TMEM116-202ENST00000437003 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
TMEM116-202ENST00000437003 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
TMEM116-202ENST00000437003 MIGA1Q8NAN2 632 aa14□□□□□ -0.17
TMEM116-202ENST00000437003 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
TMEM116-202ENST00000437003 GEMIN8Q9NWZ8 242 aaKnown RBP14□□□□□ -0.17
TMEM116-202ENST00000437003 SERTAD1Q9UHV2 236 aa14□□□□□ -0.17
TMEM116-202ENST00000437003 IQSEC3Q9UPP2 1182 aaPredicted RBP14□□□□□ -0.17
TMEM116-202ENST00000437003 NR1I3Q14994 352 aa13.99□□□□□ -0.17
TMEM116-202ENST00000437003 SUSD4Q5VX71 490 aa13.99□□□□□ -0.17
TMEM116-202ENST00000437003 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
TMEM116-202ENST00000437003 TACC3Q9Y6A5 838 aa13.99□□□□□ -0.17
TMEM116-202ENST00000437003 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
TMEM116-202ENST00000437003 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
TMEM116-202ENST00000437003 ANKRD36CQ5JPF3 1778 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 STRCQ7RTU9 1775 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 COBLO75128 1261 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 CASP14P31944 242 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 DIS3L2Q8IYB7 885 aaKnown RBP13.98□□□□□ -0.17
TMEM116-202ENST00000437003 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
TMEM116-202ENST00000437003 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 NAPGQ99747 312 aaPredicted RBP13.98□□□□□ -0.17
TMEM116-202ENST00000437003 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
TMEM116-202ENST00000437003 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
TMEM116-202ENST00000437003 NR5A1Q13285 461 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 ALX1Q15699 326 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 BRMS1Q9HCU9 246 aa13.98□□□□□ -0.17
TMEM116-202ENST00000437003 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 ZMYND10O75800 440 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 SGMS1Q86VZ5 419 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 KRI1Q8N9T8 703 aaKnown RBP13.97□□□□□ -0.17
TMEM116-202ENST00000437003 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
TMEM116-202ENST00000437003 SAFBQ15424 915 aaKnown RBP eCLIP13.97□□□□□ -0.17
TMEM116-202ENST00000437003 DNAJC21Q5F1R6 531 aaKnown RBP13.97□□□□□ -0.17
TMEM116-202ENST00000437003 LCORLQ8N3X6 602 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 MLKLQ8NB16 471 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 MED4Q9NPJ6 270 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 SLC4A4Q9Y6R1 1079 aa13.97□□□□□ -0.17
TMEM116-202ENST00000437003 hCG_1642624A0A1W2PR95 340 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 CASP1P29466 404 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 LIFRP42702 1097 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 LIG3P49916 1009 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 BCAMP50895 628 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 AKNAD1Q5T1N1 836 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 TADA2BQ86TJ2 420 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 GSPT2Q8IYD1 628 aaKnown RBP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 MYCBPQ99417 103 aaPredicted RBP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 NCAPGQ9BPX3 1015 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 ENC1O14682 589 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 CDC25AP30304 524 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 WTAPQ15007 396 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 RTN1Q16799 776 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
TMEM116-202ENST00000437003 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
TMEM116-202ENST00000437003 NHSL1Q5SYE7 1610 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 FAM237AA0A1B0GTK4 181 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 MFAP3LO75121 409 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 CCT6AP40227 531 aaKnown RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 TOB1P50616 345 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 MORC3Q14149 939 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 ERICH2A1L162 156 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 SMIM22K7EJ46 135 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 MMP1P03956 469 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 AFMP43652 599 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
TMEM116-202ENST00000437003 KRT23Q9C075 422 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 MYO6Q9UM54 1294 aa13.95□□□□□ -0.18
TMEM116-202ENST00000437003 CRKLP46109 303 aaKnown RBP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 CCT5P48643 541 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms