RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
PCOTH-203ENST00000435039 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
PCOTH-203ENST00000435039 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
PCOTH-203ENST00000435039 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 BRD1O95696 1058 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
PCOTH-203ENST00000435039 ICA1Q05084 483 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 GRM4Q14833 912 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 NTRK3Q16288 839 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 DCAF15Q66K64 600 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
PCOTH-203ENST00000435039 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
PCOTH-203ENST00000435039 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 STX6O43752 255 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 GDF11O95390 407 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 SLURP2P0DP57 97 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 SYT1P21579 422 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
PCOTH-203ENST00000435039 GNAQP50148 359 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCOTH-203ENST00000435039 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 ABT1Q9ULW3 272 aaKnown RBP13.19□□□□□ -0.3
PCOTH-203ENST00000435039 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
PCOTH-203ENST00000435039 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
PCOTH-203ENST00000435039 GH2P01242 217 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 GUCY1A2P33402 732 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 PKP1Q13835 747 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 MKL1Q969V6 931 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
PCOTH-203ENST00000435039 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
PCOTH-203ENST00000435039 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
PCOTH-203ENST00000435039 RBM27Q9P2N5 1060 aaKnown RBP13.18□□□□□ -0.3
PCOTH-203ENST00000435039 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
PCOTH-203ENST00000435039 TRAF5O00463 557 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 ASNSP08243 561 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
PCOTH-203ENST00000435039 CAP2P40123 477 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 LBX1P52954 281 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 RRP1BQ14684 758 aaKnown RBP13.17□□□□□ -0.3
PCOTH-203ENST00000435039 SEPT2Q15019 361 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
PCOTH-203ENST00000435039 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
PCOTH-203ENST00000435039 WASF1Q92558 559 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
PCOTH-203ENST00000435039 POLR2AP24928 1970 aaKnown RBP13.17□□□□□ -0.3
PCOTH-203ENST00000435039 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PLEKHA8P1O95397 391 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 DEXIO95424 95 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PARP1P09874 1014 aaKnown RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PDHBP11177 359 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 FUT2Q10981 343 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 NBPF12Q5TAG4 269 aaPredicted RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 CST9Q5W186 159 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PHKBQ93100 1093 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
PCOTH-203ENST00000435039 ZDHHC9Q9Y397 364 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
PCOTH-203ENST00000435039 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
PCOTH-203ENST00000435039 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
PCOTH-203ENST00000435039 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
PCOTH-203ENST00000435039 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
PCOTH-203ENST00000435039 JAG1P78504 1218 aa13.15□□□□□ -0.3
PCOTH-203ENST00000435039 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
PCOTH-203ENST00000435039 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
PCOTH-203ENST00000435039 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
PCOTH-203ENST00000435039 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
PCOTH-203ENST00000435039 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
PCOTH-203ENST00000435039 H3BQV1 296 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms