RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 TRIM5Q9C035 493 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 RNF181Q9P0P0 153 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 HPSEQ9Y251 543 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 LTBP3Q9NS15 1303 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 WDHD1O75717 1129 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 MARCKSP29966 332 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 CRKP46108 304 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 EIF6P56537 245 aaKnown RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 PLA2G4DQ86XP0 818 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 ELOA2Q8IYF1 753 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 TEKT1Q969V4 418 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 BPIFA3Q9BQP9 254 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 BRMS1Q9HCU9 246 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
CTCFL-209ENST00000433949 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
CTCFL-209ENST00000433949 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 PRDM1O75626 825 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 CDC25BP30305 580 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 USP5P45974 858 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 CACNB3P54284 484 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 SLF2Q8IX21 1173 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 KRI1Q8N9T8 703 aaKnown RBP13.71□□□□□ -0.21
CTCFL-209ENST00000433949 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.21
CTCFL-209ENST00000433949 PLCG2P16885 1265 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 KIF5BP33176 963 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 TERF1P54274 439 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 EVX2Q03828 476 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 FUT2Q10981 343 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 PICALMQ13492 652 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 C12orf60Q5U649 245 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 C11orf57Q6ZUT1 292 aaPredicted RBP13.71□□□□□ -0.22
CTCFL-209ENST00000433949 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.22
CTCFL-209ENST00000433949 FOCADQ5VW36 1801 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 MYH1P12882 1939 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 GPR75-ASB3A0A0A6YYF3 556 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 BMP15O95972 392 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 ZNF75DP51815 510 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 TNIP1Q15025 636 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 C9orf131Q5VYM1 1079 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 DGKHQ86XP1 1220 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 MAPKAPK5Q8IW41 473 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
CTCFL-209ENST00000433949 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
CTCFL-209ENST00000433949 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
CTCFL-209ENST00000433949 KCNJ14Q9UNX9 436 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 FZD9O00144 591 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 USP17L8P0C7I0 530 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 CFAP100Q494V2 611 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 SHC4Q6S5L8 630 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 TEX11Q8IYF3 940 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 MRFAP1L1Q96HT8 127 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 PHF20Q9BVI0 1012 aa13.7□□□□□ -0.22
CTCFL-209ENST00000433949 SAP30BPQ9UHR5 308 aaKnown RBP13.7□□□□□ -0.22
CTCFL-209ENST00000433949 ARFGEF1Q9Y6D6 1849 aa13.69□□□□□ -0.22
CTCFL-209ENST00000433949 KRT2P35908 639 aa13.69□□□□□ -0.22
CTCFL-209ENST00000433949 GMPSP49915 693 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-209ENST00000433949 PKN1Q16512 942 aa13.69□□□□□ -0.22
CTCFL-209ENST00000433949 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CTCFL-209ENST00000433949 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
CTCFL-209ENST00000433949 ANKS1AQ92625 1134 aa13.69□□□□□ -0.22
CTCFL-209ENST00000433949 FAM13BQ9NYF5 915 aa13.69□□□□□ -0.22
CTCFL-209ENST00000433949 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
CTCFL-209ENST00000433949 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
CTCFL-209ENST00000433949 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 PTPREP23469 700 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 NLRP12P59046 1061 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TPM4P67936 248 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 DRC7Q8IY82 874 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 PRMT6Q96LA8 375 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 GMLQ99445 158 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 GAKO14976 1311 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 EGFRP00533 1210 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 CYP2D6P10635 497 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 RHBDL3P58872 404 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 FKBP1AP62942 108 aaKnown RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 CDC42EP5Q6NZY7 148 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TUBE1Q9UJT0 475 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 KCNH3Q9ULD8 1083 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
CTCFL-209ENST00000433949 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
CTCFL-209ENST00000433949 CLRN2A0PK11 232 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms