RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZNF281Q9Y2X9 895 aa7.15□□□□□ -1.26
PTPN4-205ENST00000433888 PCDHA11Q9Y5I1 949 aa7.15□□□□□ -1.26
PTPN4-205ENST00000433888 BPNT1O95861 308 aa7.14□□□□□ -1.27
PTPN4-205ENST00000433888 NR0B2Q15466 257 aa7.14□□□□□ -1.27
PTPN4-205ENST00000433888 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
PTPN4-205ENST00000433888 AMIGO3Q86WK7 504 aa7.14□□□□□ -1.27
PTPN4-205ENST00000433888 ZSCAN18Q8TBC5 510 aaPredicted RBP7.14□□□□□ -1.27
PTPN4-205ENST00000433888 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
PTPN4-205ENST00000433888 ADAMTS20P59510 1910 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 SHISA3A0PJX4 238 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
PTPN4-205ENST00000433888 GRIN3BO60391 1043 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 HTR3BO95264 441 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 TMEM253P0C7T8 217 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 GLDCP23378 1020 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 GBP2P32456 591 aaPredicted RBP7.13□□□□□ -1.27
PTPN4-205ENST00000433888 ATG14Q6ZNE5 492 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 RELL1Q8IUW5 271 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 LILRA2Q8N149 483 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 CCDC74BQ96LY2 380 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 C19orf44Q9H6X5 657 aa7.13□□□□□ -1.27
PTPN4-205ENST00000433888 SORBS3O60504 671 aa7.12□□□□□ -1.27
PTPN4-205ENST00000433888 ZSCAN22P10073 491 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-205ENST00000433888 TEKQ02763 1124 aa7.12□□□□□ -1.27
PTPN4-205ENST00000433888 DIEXFQ68CQ4 756 aaKnown RBP7.12□□□□□ -1.27
PTPN4-205ENST00000433888 AEBP1Q8IUX7 1158 aa7.12□□□□□ -1.27
PTPN4-205ENST00000433888 ASPNQ9BXN1 380 aa7.12□□□□□ -1.27
PTPN4-205ENST00000433888 NPIPB6E9PJ23 425 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 MPP2Q14168 576 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 KCNA10Q16322 511 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 REC114Q7Z4M0 266 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 OXR1Q8N573 874 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 GOLM1Q8NBJ4 401 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 FBXO27Q8NI29 283 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 DHX38Q92620 1227 aaKnown RBP7.11□□□□□ -1.27
PTPN4-205ENST00000433888 SLC26A8Q96RN1 970 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 KLHL3Q9UH77 587 aa7.11□□□□□ -1.27
PTPN4-205ENST00000433888 FITM1A5D6W6 292 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 RGS13O14921 159 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 LTKP29376 864 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 FAM160A1Q05DH4 1040 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 PWP1Q13610 501 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 LINC01599Q8WXQ3 324 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 KCNN1Q92952 543 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 SHISA4Q96DD7 197 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 KIF2CQ99661 725 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 G6PC3Q9BUM1 346 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 KCNQ5Q9NR82 932 aa7.1□□□□□ -1.27
PTPN4-205ENST00000433888 SMG5Q9UPR3 1016 aaKnown RBP7.1□□□□□ -1.27
PTPN4-205ENST00000433888 SLC22A31A6NKX4 558 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 NOTOA8MTQ0 251 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 MINDY4BA8MYZ0 360 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 GREM1O60565 184 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 TNNI2P48788 182 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 FBXL19Q6PCT2 694 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 ERMP1Q7Z2K6 904 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 IRF2BP1Q8IU81 584 aa7.09□□□□□ -1.27
PTPN4-205ENST00000433888 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
PTPN4-205ENST00000433888 MYOCOSA0A1B0GUC4 107 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 UBOX5O94941 541 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 ATE1O95260 518 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 SPPL2CQ8IUH8 684 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 USHBP1Q8N6Y0 703 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 MCOLN1Q9GZU1 580 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 ZNF552Q9H707 407 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-205ENST00000433888 CWC22Q9HCG8 908 aaKnown RBP7.08□□□□□ -1.28
PTPN4-205ENST00000433888 COPRSQ9NQ92 184 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 KBTBD4Q9NVX7 518 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 VTI1BQ9UEU0 232 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 ROBO2Q9HCK4 1378 aa7.08□□□□□ -1.28
PTPN4-205ENST00000433888 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 EFEMP2O95967 443 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 CHRNEQ04844 493 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 SNX17Q15036 470 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 SNAP47Q5SQN1 464 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 ENOX1Q8TC92 643 aaKnown RBP7.07□□□□□ -1.28
PTPN4-205ENST00000433888 INTS4Q96HW7 963 aaKnown RBP7.07□□□□□ -1.28
PTPN4-205ENST00000433888 LRRC3Q9BY71 257 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
PTPN4-205ENST00000433888 PSPNO60542 156 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 PEX10O60683 326 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 GBP1P32455 592 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 TTLL10Q6ZVT0 673 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 PHACTR4Q8IZ21 702 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 ANKS4BQ8N8V4 417 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 SYTL5Q8TDW5 730 aaPredicted RBP7.06□□□□□ -1.28
PTPN4-205ENST00000433888 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 KRTAP4-2Q9BYR5 136 aa7.06□□□□□ -1.28
PTPN4-205ENST00000433888 TLR3O15455 904 aaKnown RBP7.05□□□□□ -1.28
PTPN4-205ENST00000433888 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
PTPN4-205ENST00000433888 ERCC3P19447 782 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 LINC00310P59036 64 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 GCM1Q9NP62 436 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
PTPN4-205ENST00000433888 DLG4P78352 724 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 DUSP4Q13115 394 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms