RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ATF4P18848 351 aaPredicted RBP5.57□□□□□ -1.52
LINC01239-201ENST00000433645 FUT4P22083 530 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 EIF6P56537 245 aaKnown RBP5.57□□□□□ -1.52
LINC01239-201ENST00000433645 CHMP4BP1P59074 171 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 ANGEL2Q5VTE6 544 aaKnown RBP5.57□□□□□ -1.52
LINC01239-201ENST00000433645 FLCNQ8NFG4 579 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 SMARCC1Q92922 1105 aaPredicted RBP5.57□□□□□ -1.52
LINC01239-201ENST00000433645 HSPA12BQ96MM6 686 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 SRRTQ9BXP5 876 aaKnown RBP5.57□□□□□ -1.52
LINC01239-201ENST00000433645 PRR13Q9NZ81 148 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 PPT2Q9UMR5 302 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 SLC12A7Q9Y666 1083 aa5.57□□□□□ -1.52
LINC01239-201ENST00000433645 CLEC3AO75596 197 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 CD8BP10966 210 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 XP32Q5T750 250 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 NBPF12Q5TAG4 269 aaPredicted RBP5.56□□□□□ -1.52
LINC01239-201ENST00000433645 SLC23A3Q6PIS1 610 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 SPRED2Q7Z698 418 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 LSRQ86X29 649 aaPredicted RBP5.56□□□□□ -1.52
LINC01239-201ENST00000433645 TP53INP2Q8IXH6 220 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 SLC9A7Q96T83 725 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 DUSP15Q9H1R2 295 aaPredicted RBP5.56□□□□□ -1.52
LINC01239-201ENST00000433645 ANTXR1Q9H6X2 564 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 CAPN10Q9HC96 672 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 GPATCH2Q9NW75 528 aa5.56□□□□□ -1.52
LINC01239-201ENST00000433645 NASPP49321 788 aaPredicted RBP5.55□□□□□ -1.52
LINC01239-201ENST00000433645 BNIP3Q12983 259 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 BBS9Q3SYG4 887 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 CBLL1Q75N03 491 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 SHDQ96IW2 340 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 GMLQ99445 158 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 TINF2Q9BSI4 451 aa5.55□□□□□ -1.52
LINC01239-201ENST00000433645 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
LINC01239-201ENST00000433645 OAS3Q9Y6K5 1087 aaKnown RBP5.55□□□□□ -1.52
LINC01239-201ENST00000433645 ACRP10323 421 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 POLR2BP30876 1174 aaKnown RBP5.54□□□□□ -1.52
LINC01239-201ENST00000433645 CASP7P55210 303 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 GAB4Q2WGN9 574 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 CDKAL1Q5VV42 579 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 FBXW10Q5XX13 1052 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 TSPYL5Q86VY4 417 aaPredicted RBP5.54□□□□□ -1.52
LINC01239-201ENST00000433645 UBE2FQ969M7 185 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 CCDC120Q96HB5 630 aa5.54□□□□□ -1.52
LINC01239-201ENST00000433645 H3BS24 57 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 PMS1P54277 932 aaKnown RBP5.53□□□□□ -1.52
LINC01239-201ENST00000433645 ZC3H6P61129 1189 aaKnown RBP5.53□□□□□ -1.52
LINC01239-201ENST00000433645 IKZF1Q13422 519 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 TMEM192Q8IY95 271 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 ABI1Q8IZP0 508 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
LINC01239-201ENST00000433645 SLC6A18Q96N87 628 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 ASCC2Q9H1I8 757 aaPredicted RBP5.53□□□□□ -1.52
LINC01239-201ENST00000433645 PHAXQ9H814 394 aaKnown RBP5.53□□□□□ -1.52
LINC01239-201ENST00000433645 ADGRE2Q9UHX3 823 aa5.53□□□□□ -1.52
LINC01239-201ENST00000433645 ARID5AQ03989 594 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 ZP2Q05996 745 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 PLCL1Q15111 1095 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 UNC5AQ6ZN44 842 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF574Q6ZN55 896 aaPredicted RBP5.52□□□□□ -1.53
LINC01239-201ENST00000433645 DAGLBQ8NCG7 672 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 PI4K2BQ8TCG2 481 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 C8orf37Q96NL8 207 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 ATP13A1Q9HD20 1204 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 ZSWIM5Q9P217 1185 aa5.52□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
LINC01239-201ENST00000433645 LRRN2O75325 713 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 ESR1P03372 595 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 FGRP09769 529 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
LINC01239-201ENST00000433645 IRAK1P51617 712 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 NMIQ13287 307 aaPredicted RBP5.51□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF792Q3KQV3 632 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 TNNI3KQ59H18 835 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 CCDC81Q6ZN84 652 aa5.51□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF655Q8N720 491 aaPredicted RBP5.51□□□□□ -1.53
LINC01239-201ENST00000433645 A0A1W2PQH9 124 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 SIGLEC6O43699 453 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 CD96P40200 585 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 AUHQ13825 339 aaKnown RBP5.5□□□□□ -1.53
LINC01239-201ENST00000433645 CLEC16AQ2KHT3 1053 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 RUFY4Q6ZNE9 571 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 ATG4DQ86TL0 474 aaPredicted RBP5.5□□□□□ -1.53
LINC01239-201ENST00000433645 TTC6Q86TZ1 520 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 C7orf61Q8IZ16 206 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 HDAC8Q9BY41 377 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 MKRN2Q9H000 416 aaKnown RBP5.5□□□□□ -1.53
LINC01239-201ENST00000433645 MBNL3Q9NUK0 354 aaKnown RBP5.5□□□□□ -1.53
LINC01239-201ENST00000433645 PCDHB12Q9Y5F1 795 aa5.5□□□□□ -1.53
LINC01239-201ENST00000433645 A0A087WZG4 1122 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 BIN1O00499 593 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 SSBP05455 408 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 JUNBP17275 347 aaPredicted RBP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 ITGB5P18084 799 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 ENDOUP21128 410 aaKnown RBP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms