RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 KDM4AO75164 1064 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 CYP21A2P08686 494 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 IQCA1Q86XH1 822 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 LRRC47Q8N1G4 583 aaKnown RBP18.31■□□□□ 0.52
TREX1-201ENST00000433541 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.31■□□□□ 0.52
TREX1-201ENST00000433541 ASCC2Q9H1I8 757 aaPredicted RBP18.31■□□□□ 0.52
TREX1-201ENST00000433541 VCPKMTQ9H867 229 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
TREX1-201ENST00000433541 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 REC8O95072 547 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 KIF22Q14807 665 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 RNF20Q5VTR2 975 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 ZNF296Q8WUU4 475 aaPredicted RBP18.3■□□□□ 0.52
TREX1-201ENST00000433541 LPAR1Q92633 364 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 UBAC1Q9BSL1 405 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
TREX1-201ENST00000433541 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
TREX1-201ENST00000433541 FGRP09769 529 aa18.29■□□□□ 0.52
TREX1-201ENST00000433541 SP3Q02447 781 aa18.29■□□□□ 0.52
TREX1-201ENST00000433541 SIAH1Q8IUQ4 282 aa18.29■□□□□ 0.52
TREX1-201ENST00000433541 WDR46O15213 610 aaKnown RBP18.28■□□□□ 0.52
TREX1-201ENST00000433541 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
TREX1-201ENST00000433541 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
TREX1-201ENST00000433541 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
TREX1-201ENST00000433541 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
TREX1-201ENST00000433541 PAGR1Q9BTK6 254 aa18.28■□□□□ 0.52
TREX1-201ENST00000433541 MGAMO43451 1857 aa18.28■□□□□ 0.52
TREX1-201ENST00000433541 ERICH2A1L162 156 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 E7EWF7 191 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 F5H6K3 240 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 FLOT1O75955 427 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.52
TREX1-201ENST00000433541 NT5C2P49902 561 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 HERVK_113P62684 666 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 KLRC3Q07444 240 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 CCDC178Q5BJE1 867 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
TREX1-201ENST00000433541 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
TREX1-201ENST00000433541 SLC27A2O14975 620 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 GCLCP48506 637 aaPredicted RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 SART3Q15020 963 aaKnown RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 NUP88Q99567 741 aaPredicted RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 IL17RBQ9NRM6 502 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
TREX1-201ENST00000433541 ZSWIM8A7E2V4 1837 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 PARP14Q460N5 1801 aa18.26■□□□□ 0.51
TREX1-201ENST00000433541 NDUFB10O96000 172 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
TREX1-201ENST00000433541 CCDC96Q2M329 555 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
TREX1-201ENST00000433541 SLFN13Q68D06 897 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
TREX1-201ENST00000433541 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 TCP11L1Q9NUJ3 509 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
TREX1-201ENST00000433541 COL11A1P12107 1806 aaPredicted RBP18.25■□□□□ 0.51
TREX1-201ENST00000433541 TNKSO95271 1327 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 SLC1A4P43007 532 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 COG2Q14746 738 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 MKL1Q969V6 931 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
TREX1-201ENST00000433541 SYNPO2Q9UMS6 1093 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 TAF6LQ9Y6J9 622 aa18.24■□□□□ 0.51
TREX1-201ENST00000433541 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
TREX1-201ENST00000433541 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
TREX1-201ENST00000433541 MCCP23508 829 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 PLS1Q14651 629 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
TREX1-201ENST00000433541 CHST3Q7LGC8 479 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 TTC14Q96N46 770 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 HOXC10Q9NYD6 342 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 TRIM17Q9Y577 477 aa18.23■□□□□ 0.51
TREX1-201ENST00000433541 BCRP11274 1271 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms