RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 RASEFQ8IZ41 740 aa21.72■■□□□ 1.07
RFTN1-202ENST00000431547 LPAR1Q92633 364 aa21.72■■□□□ 1.07
RFTN1-202ENST00000431547 STX8Q9UNK0 236 aa21.72■■□□□ 1.07
RFTN1-202ENST00000431547 GREB1LQ9C091 1923 aaPredicted RBP21.71■■□□□ 1.07
RFTN1-202ENST00000431547 DGKHQ86XP1 1220 aa21.71■■□□□ 1.07
RFTN1-202ENST00000431547 ZSCAN10Q96SZ4 725 aaPredicted RBP21.71■■□□□ 1.07
RFTN1-202ENST00000431547 GOPCQ9HD26 462 aa21.71■■□□□ 1.07
RFTN1-202ENST00000431547 VCAM1P19320 739 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 KRT32Q14532 448 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 KIAA1755Q5JYT7 1200 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 RCSD1Q6JBY9 416 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 CYB5R4Q7L1T6 521 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
RFTN1-202ENST00000431547 GMCL1P1Q8NEA9 526 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 ANKS1AQ92625 1134 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 ZKSCAN3Q9BRR0 538 aa21.7■■□□□ 1.06
RFTN1-202ENST00000431547 F5H6K3 240 aa21.69■■□□□ 1.06
RFTN1-202ENST00000431547 TOP1P11387 765 aaKnown RBP21.69■■□□□ 1.06
RFTN1-202ENST00000431547 KLRC3Q07444 240 aa21.69■■□□□ 1.06
RFTN1-202ENST00000431547 TAF1CQ15572 869 aaPredicted RBP21.69■■□□□ 1.06
RFTN1-202ENST00000431547 UBAC1Q9BSL1 405 aa21.69■■□□□ 1.06
RFTN1-202ENST00000431547 ZFYVE28Q9HCC9 887 aa21.69■■□□□ 1.06
RFTN1-202ENST00000431547 MYH8P13535 1937 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L15C9J2P7 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L13C9JLJ4 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L11C9JVI0 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L18D6R9N7 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L22D6RA61 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L17D6RBQ6 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L19D6RCP7 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L20D6RJB6 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 SEC24BO95487 1268 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 HSPA1AP0DMV8 641 aaKnown RBP21.68■■□□□ 1.06
RFTN1-202ENST00000431547 HSPA1BP0DMV9 641 aaKnown RBP21.68■■□□□ 1.06
RFTN1-202ENST00000431547 OSBPP22059 807 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 MCCP23508 829 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 USP17L24Q0WX57 530 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 LRRC47Q8N1G4 583 aaKnown RBP21.68■■□□□ 1.06
RFTN1-202ENST00000431547 NEK1Q96PY6 1258 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 TMEM47Q9BQJ4 181 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 MTA3Q9BTC8 594 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 PNMA3Q9UL41 463 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 SNX14Q9Y5W7 946 aa21.68■■□□□ 1.06
RFTN1-202ENST00000431547 TNKSO95271 1327 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 WDR46O15213 610 aaKnown RBP21.67■■□□□ 1.06
RFTN1-202ENST00000431547 TBC1D8O95759 1140 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 MCM5P33992 734 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 CRHR2Q13324 411 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 CATSPERGQ6ZRH7 1159 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 SPICE1Q8N0Z3 855 aa21.67■■□□□ 1.06
RFTN1-202ENST00000431547 ENAHQ8N8S7 591 aaPredicted RBP21.67■■□□□ 1.06
RFTN1-202ENST00000431547 PARK7Q99497 189 aaKnown RBP21.67■■□□□ 1.06
RFTN1-202ENST00000431547 ASCC2Q9H1I8 757 aaPredicted RBP21.67■■□□□ 1.06
RFTN1-202ENST00000431547 RPAP3Q9H6T3 665 aaPredicted RBP21.67■■□□□ 1.06
RFTN1-202ENST00000431547 NDUFB10O96000 172 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 CYP2C8P10632 490 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 ANTXR2P58335 489 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 SEC23AQ15436 765 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 ADCK5Q3MIX3 580 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 R3HDMLQ9H3Y0 253 aa21.66■■□□□ 1.06
RFTN1-202ENST00000431547 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
RFTN1-202ENST00000431547 FOXN1O15353 648 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 RAD21O60216 631 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 TLR2O60603 784 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 HMGB1P09429 215 aaKnown RBP21.65■■□□□ 1.06
RFTN1-202ENST00000431547 IRX3P78415 501 aaPredicted RBP21.65■■□□□ 1.06
RFTN1-202ENST00000431547 SART3Q15020 963 aaKnown RBP21.65■■□□□ 1.06
RFTN1-202ENST00000431547 NOM1Q5C9Z4 860 aaKnown RBP21.65■■□□□ 1.06
RFTN1-202ENST00000431547 SLFN13Q68D06 897 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 GMCL1Q96IK5 515 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 LOC285556D6RIA3 1793 aa21.65■■□□□ 1.06
RFTN1-202ENST00000431547 ERICH2A1L162 156 aa21.64■■□□□ 1.05
RFTN1-202ENST00000431547 PRC1O43663 620 aa21.64■■□□□ 1.05
RFTN1-202ENST00000431547 COL9A3Q14050 684 aaPredicted RBP21.64■■□□□ 1.05
RFTN1-202ENST00000431547 CHST3Q7LGC8 479 aa21.64■■□□□ 1.05
RFTN1-202ENST00000431547 IGDCC4Q8TDY8 1250 aa21.64■■□□□ 1.05
RFTN1-202ENST00000431547 P2RX7Q99572 595 aaKnown RBP21.64■■□□□ 1.05
RFTN1-202ENST00000431547 PTPRFP10586 1907 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 ADGRA2Q96PE1 1338 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 PSMA5P28066 241 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 CTCFP49711 727 aaPredicted RBP21.63■■□□□ 1.05
RFTN1-202ENST00000431547 EXOSC10Q01780 885 aaKnown RBP21.63■■□□□ 1.05
RFTN1-202ENST00000431547 COG2Q14746 738 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 FAM83BQ5T0W9 1011 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 IFIT1BQ5T764 474 aaKnown RBP21.63■■□□□ 1.05
RFTN1-202ENST00000431547 DHX32Q7L7V1 743 aaKnown RBP21.63■■□□□ 1.05
RFTN1-202ENST00000431547 SMCR8Q8TEV9 937 aaPredicted RBP21.63■■□□□ 1.05
RFTN1-202ENST00000431547 TMEM87BQ96K49 555 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 TANGO6Q9C0B7 1094 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 KAT14Q9H8E8 782 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 HOXC10Q9NYD6 342 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
RFTN1-202ENST00000431547 HSPA8P11142 646 aaKnown RBP21.62■■□□□ 1.05
RFTN1-202ENST00000431547 BMP3P12645 472 aa21.62■■□□□ 1.05
RFTN1-202ENST00000431547 GCLCP48506 637 aaPredicted RBP21.62■■□□□ 1.05
RFTN1-202ENST00000431547 ANAPC15P60006 121 aa21.62■■□□□ 1.05
RFTN1-202ENST00000431547 HERVK_113P62684 666 aa21.62■■□□□ 1.05
RFTN1-202ENST00000431547 TMEM67Q5HYA8 995 aa21.62■■□□□ 1.05
RFTN1-202ENST00000431547 C17orf99Q6UX52 265 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms