RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 MCCP23508 829 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 HERVK_113P62684 666 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
LAMA4-208ENST00000431543 SPICE1Q8N0Z3 855 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 RPAP3Q9H6T3 665 aaPredicted RBP16.91■□□□□ 0.3
LAMA4-208ENST00000431543 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 TXNRD2Q9NNW7 524 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 RBPJLQ9UBG7 517 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
LAMA4-208ENST00000431543 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
LAMA4-208ENST00000431543 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
LAMA4-208ENST00000431543 HAND2P61296 217 aa16.9■□□□□ 0.3
LAMA4-208ENST00000431543 ARHGEF6Q15052 776 aa16.9■□□□□ 0.3
LAMA4-208ENST00000431543 Q3C1V9 767 aa16.9■□□□□ 0.3
LAMA4-208ENST00000431543 CTNNA3Q9UI47 895 aa16.9■□□□□ 0.3
LAMA4-208ENST00000431543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
LAMA4-208ENST00000431543 SLC3A2P08195 630 aaKnown RBP16.89■□□□□ 0.29
LAMA4-208ENST00000431543 TFAP4Q01664 338 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 PDE4BQ07343 736 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 NBPF3Q9H094 633 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 VCPKMTQ9H867 229 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 GABRQQ9UN88 632 aa16.89■□□□□ 0.29
LAMA4-208ENST00000431543 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
LAMA4-208ENST00000431543 CENPFP49454 3210 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 FCGRTP55899 365 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 PAGR1Q9BTK6 254 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
LAMA4-208ENST00000431543 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
LAMA4-208ENST00000431543 MGAMO43451 1857 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 NMT2O60551 498 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 CNMDO75829 334 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 TANGO6Q9C0B7 1094 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 SH2D4AQ9H788 454 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 MTMR4Q9NYA4 1195 aa16.87■□□□□ 0.29
LAMA4-208ENST00000431543 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
LAMA4-208ENST00000431543 RAD21O60216 631 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 GNRH1P01148 92 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 FGRP09769 529 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 PRKCZQ05513 592 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 COG2Q14746 738 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 LPAR1Q92633 364 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
LAMA4-208ENST00000431543 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
LAMA4-208ENST00000431543 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 BTBD7Q9P203 1132 aa16.86■□□□□ 0.29
LAMA4-208ENST00000431543 SPDYE16A6NNV3 312 aaPredicted RBP16.85■□□□□ 0.29
LAMA4-208ENST00000431543 F5H6K3 240 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 ORC4O43929 436 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
LAMA4-208ENST00000431543 SEC24BO95487 1268 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 HOXD10P28358 340 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 SOX10P56693 466 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 ERVK-24P63145 666 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 KLRC3Q07444 240 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
LAMA4-208ENST00000431543 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
LAMA4-208ENST00000431543 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 SH3TC2Q8TF17 1288 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 MKL1Q969V6 931 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 PORCNQ9H237 461 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 ZMYM6O95789 1325 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 MYPNQ86TC9 1320 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
LAMA4-208ENST00000431543 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 NDUFB10O96000 172 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
LAMA4-208ENST00000431543 FLT3LGP49771 235 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 PTH1RQ03431 593 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
LAMA4-208ENST00000431543 C22orf23Q9BZE7 217 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 RABGAP1Q9Y3P9 1069 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 RLFQ13129 1914 aa16.84■□□□□ 0.29
LAMA4-208ENST00000431543 ZNF213O14771 459 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms