RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 TANGO6Q9C0B7 1094 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 RABGAP1Q9Y3P9 1069 aa12.21□□□□□ -0.45
HMGN1P38-201ENST00000431116 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.46
HMGN1P38-201ENST00000431116 RPTORQ8N122 1335 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 USP17L21D6R901 530 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 ICA1Q05084 483 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 LBX2Q6XYB7 198 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 APBA2Q99767 749 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 ARHGEF10LQ9HCE6 1279 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 ZNF236Q9UL36 1845 aa12.2□□□□□ -0.46
HMGN1P38-201ENST00000431116 GLRX3O76003 335 aaKnown RBP12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 CAPN2P17655 700 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 CDK8P49336 464 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 RRP1P56182 461 aaKnown RBP12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 MORN1Q5T089 497 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 DIS3LQ8TF46 1054 aaKnown RBP12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 USP6NLQ92738 828 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 SH2D4AQ9H788 454 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 BTBD7Q9P203 1132 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
HMGN1P38-201ENST00000431116 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 ATP2B2Q01814 1243 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 COG2Q14746 738 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 CCL14Q16627 93 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 POTEHQ6S545 545 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 SPICE1Q8N0Z3 855 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 APPBP2Q92624 585 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 LPAR1Q92633 364 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 PAWRQ96IZ0 340 aaKnown RBP12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 IVNS1ABPQ9Y6Y0 642 aa12.18□□□□□ -0.46
HMGN1P38-201ENST00000431116 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 FLOT1O75955 427 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 NECAB2Q7Z6G3 386 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 TMX2Q9Y320 296 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 ROBO3Q96MS0 1386 aa12.17□□□□□ -0.46
HMGN1P38-201ENST00000431116 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 M0R2C6 588 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 ERC2O15083 957 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 GPAA1O43292 621 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 EVI5O60447 810 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 ZFYP08048 801 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 EEF2P13639 858 aaKnown RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 PTPREP23469 700 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 CCND3P30281 292 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 CACNB2Q08289 660 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 GRB14Q14449 540 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 STK11IPQ8N1F8 1099 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 KANSL2Q9H9L4 492 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 HOXC10Q9NYD6 342 aa12.16□□□□□ -0.46
HMGN1P38-201ENST00000431116 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 RAD21O60216 631 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 GNAT2P19087 354 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 MX1P20591 662 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 TDO2P48775 406 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 PLS1Q14651 629 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 LRRFIP1Q32MZ4 808 aaKnown RBP12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 SBK1Q52WX2 424 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 MB21D1Q8N884 522 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 PI4K2BQ8TCG2 481 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 ATG4CQ96DT6 458 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 FSD1Q9BTV5 496 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 FLRT1Q9NZU1 646 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.46
HMGN1P38-201ENST00000431116 APPP05067 770 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 HOXC6P09630 235 aa12.14□□□□□ -0.47
HMGN1P38-201ENST00000431116 ERCC3P19447 782 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms