RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 DOCK3Q8IZD9 2030 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 LAMA3Q16787 3333 aa9.66□□□□□ -0.86
ECHDC1-207ENST00000430841 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 KBTBD13C9JR72 458 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 BAG3O95817 575 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 HLA-DOAP06340 250 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 CCDC102BQ68D86 513 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 PLEKHH3Q7Z736 793 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 MORF4L1Q9UBU8 362 aa9.65□□□□□ -0.86
ECHDC1-207ENST00000430841 RFX7Q2KHR2 1363 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 PFASO15067 1338 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 PDS5AQ29RF7 1337 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 C19orf81C9J6K1 198 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 FOSL2P15408 326 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 CAP2P40123 477 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 HERVK_113P62684 666 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 ATP2B2Q01814 1243 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 MECOMQ03112 1051 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 CACNB2Q08289 660 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 RASGRF1Q13972 1273 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 LRRC26Q2I0M4 334 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 NEUROD6Q96NK8 337 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 DHX36Q9H2U1 1008 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 DDX4Q9NQI0 724 aaKnown RBP9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 ATP11BQ9Y2G3 1177 aa9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 COL2A1P02458 1487 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 BACE1P56817 501 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 ERVK-9P63128 1117 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 ERVK-24P63145 666 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 TREML4Q6UXN2 200 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 SH3BP5LQ7L8J4 393 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 GPR142Q7Z601 462 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 PI4KBQ9UBF8 816 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 GJD2Q9UKL4 321 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 MAST2Q6P0Q8 1798 aa9.63□□□□□ -0.87
ECHDC1-207ENST00000430841 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 CCND3P30281 292 aaPredicted RBP9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 ADORA1P30542 326 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 PRSS12P56730 875 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 MAP3K21Q5TCX8 1036 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 ATG9AQ7Z3C6 839 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 FAM9BQ8IZU0 186 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 TATDN2Q93075 761 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 GUCD1Q96NT3 240 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 P2RX7Q99572 595 aaKnown RBP9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 USP44Q9H0E7 712 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 GINM1Q9NU53 330 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 SLC5A4Q9NY91 659 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
ECHDC1-207ENST00000430841 FRMPD3Q5JV73 1810 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 DNM1LO00429 736 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 COL6A1P12109 1028 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 USP14P54578 494 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 RTP1P59025 263 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 COPS2P61201 443 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 EDC3Q96F86 508 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 WDR18Q9BV38 432 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 DDX20Q9UHI6 824 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-207ENST00000430841 GDF11O95390 407 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 UQCRFS1P1P0C7P4 283 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 HOXA7P31268 230 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 OS9Q13438 667 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 CCL14Q16627 93 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 CCDC184Q52MB2 194 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 SPATA5Q8NB90 893 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 MYLIPQ8WY64 445 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 LPAR1Q92633 364 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 RNPC3Q96LT9 517 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 CDX2Q99626 313 aaPredicted RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 PA2G4Q9UQ80 394 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 RABGAP1Q9Y3P9 1069 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 PLXNB2O15031 1838 aa9.6□□□□□ -0.87
ECHDC1-207ENST00000430841 SLC15A5A6NIM6 579 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L15C9J2P7 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L13C9JLJ4 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L11C9JVI0 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L18D6R9N7 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L22D6RA61 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L17D6RBQ6 530 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms