RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
ATG4B-212ENST00000430617 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 GPR75-ASB3A0A0A6YYF3 556 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 TLL1O43897 1013 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 GNAI3P08754 354 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 GTF3C2Q8WUA4 911 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
ATG4B-212ENST00000430617 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
ATG4B-212ENST00000430617 TRIOO75962 3097 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 SMIM22K7EJ46 135 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 ERC2O15083 957 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 TIMP1P01033 207 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 ACRP10323 421 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 CCNA1P78396 465 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 SLC44A5Q8NCS7 719 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 CD320Q9NPF0 282 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 ABCF2Q9UG63 623 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
ATG4B-212ENST00000430617 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-212ENST00000430617 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 EYA2O00167 538 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 GDF11O95390 407 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 IGHDP01880 384 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 GNAI2P04899 355 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 ASNSP08243 561 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-212ENST00000430617 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-212ENST00000430617 NHLH1Q02575 133 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 MECOMQ03112 1051 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-212ENST00000430617 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
ATG4B-212ENST00000430617 IVNS1ABPQ9Y6Y0 642 aa12.3□□□□□ -0.44
ATG4B-212ENST00000430617 MYH8P13535 1937 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 SEMA3EO15041 775 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 COBLO75128 1261 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 PGK1P00558 417 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 CSF2RAP15509 400 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 ADORA2AP29274 412 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 ADORA1P30542 326 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 SKIV2LQ15477 1246 aaKnown RBP12.29□□□□□ -0.44
ATG4B-212ENST00000430617 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
ATG4B-212ENST00000430617 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 DPP9Q86TI2 863 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 GNL3LQ9NVN8 582 aaKnown RBP12.29□□□□□ -0.44
ATG4B-212ENST00000430617 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 TBX21Q9UL17 535 aa12.29□□□□□ -0.44
ATG4B-212ENST00000430617 RFXAPO00287 272 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 RAB30Q15771 203 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 CATSPERGQ6ZRH7 1159 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-212ENST00000430617 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
ATG4B-212ENST00000430617 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 TOX2Q96NM4 488 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 XPNPEP3Q9NQH7 507 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
ATG4B-212ENST00000430617 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 MYOGP15173 224 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 RABGGTBP53611 331 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.451e-10■■□□□ 12.8
ATG4B-212ENST00000430617 MTX1Q13505 466 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 KRT40Q6A162 431 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 SMC5Q8IY18 1101 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-212ENST00000430617 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
ATG4B-212ENST00000430617 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms