RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 KCNB2Q92953 911 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 TTC14Q96N46 770 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZFYVE28Q9HCC9 887 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 PHIPQ8WWQ0 1821 aa11.2□□□□□ -0.62
SMARCAL1-207ENST00000430374 GREB1LQ9C091 1923 aaPredicted RBP11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 F5H6K3 240 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 TBC1D8O95759 1140 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 CYP2C8P10632 490 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 OSBPP22059 807 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 HSPA4P34932 840 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 ATP2B2Q01814 1243 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 KLRC3Q07444 240 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 RCSD1Q6JBY9 416 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 NCOA7Q8NI08 942 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 ANKS1AQ92625 1134 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 GPR25O00155 361 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 NDUFB10O96000 172 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 C17orf99Q6UX52 265 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 CATSPERGQ6ZRH7 1159 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 CYB5R4Q7L1T6 521 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 MB21D2Q8IYB1 491 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 SPICE1Q8N0Z3 855 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZSCAN10Q96SZ4 725 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 USP26Q9BXU7 913 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 ATAD5Q96QE3 1844 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
SMARCAL1-207ENST00000430374 TNKSO95271 1327 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 BCRP11274 1271 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 GCLCP48506 637 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 LBX1P52954 281 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 HERVK_113P62684 666 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 KRT32Q14532 448 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 SEC23AQ15436 765 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 SMCR8Q8TEV9 937 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 TMEM47Q9BQJ4 181 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 UBAC1Q9BSL1 405 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
SMARCAL1-207ENST00000430374 SNHG28P0DPA3 235 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 ANTXR2P58335 489 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 COG2Q14746 738 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 ZNF296Q8WUU4 475 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 HTTP42858 3142 aa11.16□□□□□ -0.62
SMARCAL1-207ENST00000430374 WDR19Q8NEZ3 1342 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 PLA2G6O60733 806 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 FKTNO75072 461 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 MCM5P33992 734 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 SLC1A4P43007 532 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 SP3Q02447 781 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 COL9A3Q14050 684 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 ADCK5Q3MIX3 580 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 DCAF4Q8WV16 495 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms