RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ARMC5Q96C12 935 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 CEP95Q96GE4 821 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 TRIM47Q96LD4 638 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 FEZ1Q99689 392 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 VCPKMTQ9H867 229 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 IL17RBQ9NRM6 502 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 NYAP2Q9P242 653 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 MORF4L1Q9UBU8 362 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 CNMDO75829 334 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 MFAP1P55081 439 aaKnown RBP20.7■□□□□ 0.9
CTSD-203ENST00000429746 HERVK_113P62684 666 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 PDE4BQ07343 736 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 FAM110CQ1W6H9 321 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 MTMR4Q9NYA4 1195 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 RBPJLQ9UBG7 517 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
CTSD-203ENST00000429746 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.97e-15■■■■□ 20.1
CTSD-203ENST00000429746 LBX2Q6XYB7 198 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 NBPF11Q86T75 865 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 MKL1Q969V6 931 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
CTSD-203ENST00000429746 PPP4R2Q9NY27 417 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 NEDD4P46934 1319 aa20.69■□□□□ 0.9
CTSD-203ENST00000429746 RBBP6Q7Z6E9 1792 aaKnown RBP20.69■□□□□ 0.9
CTSD-203ENST00000429746 SPDYE16A6NNV3 312 aaPredicted RBP20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L15C9J2P7 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L13C9JLJ4 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L11C9JVI0 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L18D6R9N7 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L22D6RA61 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L17D6RBQ6 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L19D6RCP7 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L20D6RJB6 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 NMT2O60551 498 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 OSBPP22059 807 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 TFAP4Q01664 338 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 USP17L24Q0WX57 530 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 ZNF444Q8N0Y2 327 aaPredicted RBP20.68■□□□□ 0.9
CTSD-203ENST00000429746 ANKRD13CQ8N6S4 541 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
CTSD-203ENST00000429746 ARHGEF10LQ9HCE6 1279 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 TAF6LQ9Y6J9 622 aa20.68■□□□□ 0.9
CTSD-203ENST00000429746 COL11A1P12107 1806 aaPredicted RBP20.68■□□□□ 0.9
CTSD-203ENST00000429746 TNRC18O15417 2968 aaPredicted RBP20.67■□□□□ 0.9
CTSD-203ENST00000429746 HOXD10P28358 340 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
CTSD-203ENST00000429746 Q3C1V9 767 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 SPICE1Q8N0Z3 855 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 LPAR1Q92633 364 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
CTSD-203ENST00000429746 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
CTSD-203ENST00000429746 IRX3P78415 501 aaPredicted RBP20.66■□□□□ 0.9
CTSD-203ENST00000429746 TSPY3P0CV98 308 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 TSPY8P0CW00 308 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 PSMC4P43686 418 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 RCSD1Q6JBY9 416 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 ESYT1Q9BSJ8 1104 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 LSG1Q9H089 658 aaKnown RBP20.65■□□□□ 0.9
CTSD-203ENST00000429746 BTBD7Q9P203 1132 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
CTSD-203ENST00000429746 WDR46O15213 610 aaKnown RBP20.64■□□□□ 0.89
CTSD-203ENST00000429746 ECM2O94769 699 aaPredicted RBP20.64■□□□□ 0.89
CTSD-203ENST00000429746 NDUFB10O96000 172 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 ATP2B2Q01814 1243 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 SLC9C1Q4G0N8 1177 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 RASGRP2Q7LDG7 609 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 MAP4K1Q92918 833 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 SH2D4AQ9H788 454 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 SYNPO2Q9UMS6 1093 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 ADAMTS5Q9UNA0 930 aa20.64■□□□□ 0.89
CTSD-203ENST00000429746 F5H6K3 240 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 TTLL1O95922 423 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 CYP21A2P08686 494 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
CTSD-203ENST00000429746 KLRC3Q07444 240 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 LRRC47Q8N1G4 583 aaKnown RBP20.63■□□□□ 0.89
CTSD-203ENST00000429746 GMCL1P1Q8NEA9 526 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 RUFY2Q8WXA3 655 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 ZNF333Q96JL9 665 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 NUP88Q99567 741 aaPredicted RBP20.63■□□□□ 0.89
CTSD-203ENST00000429746 TCP11L1Q9NUJ3 509 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 FBXO28Q9NVF7 368 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 SRRDQ9UH36 339 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 GABRQQ9UN88 632 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 PTCH2Q9Y6C5 1203 aa20.63■□□□□ 0.89
CTSD-203ENST00000429746 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 ZNF213O14771 459 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 RANBP6O60518 1105 aaKnown RBP20.62■□□□□ 0.89
CTSD-203ENST00000429746 DSG3P32926 999 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 ERVK-9P63128 1117 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 ERVK-24P63145 666 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 FAM83BQ5T0W9 1011 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 REPS2Q8NFH8 660 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 TMEM106CQ9BVX2 250 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 PORCNQ9H237 461 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 RABGAP1Q9Y3P9 1069 aa20.62■□□□□ 0.89
CTSD-203ENST00000429746 MYPNQ86TC9 1320 aa20.61■□□□□ 0.89
CTSD-203ENST00000429746 PRKCZQ05513 592 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms