RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 F5H6K3 240 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 WDR46O15213 610 aaKnown RBP17.6■□□□□ 0.41
GARNL3-204ENST00000429629 OSBPP22059 807 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 KLRC3Q07444 240 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 MB21D2Q8IYB1 491 aaPredicted RBP17.6■□□□□ 0.41
GARNL3-204ENST00000429629 RASEFQ8IZ41 740 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 TMTC2Q8N394 836 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 ZFYVE28Q9HCC9 887 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 STX8Q9UNK0 236 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 DOCK1Q14185 1865 aa17.6■□□□□ 0.41
GARNL3-204ENST00000429629 VCAM1P19320 739 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 MCM5P33992 734 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 ANAPC15P60006 121 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
GARNL3-204ENST00000429629 CATSPERGQ6ZRH7 1159 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 GTF3C2Q8WUA4 911 aaPredicted RBP17.59■□□□□ 0.41
GARNL3-204ENST00000429629 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 PARK7Q99497 189 aaKnown RBP17.59■□□□□ 0.41
GARNL3-204ENST00000429629 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
GARNL3-204ENST00000429629 MYPNQ86TC9 1320 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 NMT2O60551 498 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 TLR2O60603 784 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 PLA2G6O60733 806 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 TRPA1O75762 1119 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 PSMA5P28066 241 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 ATP2B2Q01814 1243 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 SEC23AQ15436 765 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 TREML2Q5T2D2 321 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 LBX2Q6XYB7 198 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 CYB5R4Q7L1T6 521 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 CLEC10AQ8IUN9 316 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 FBXL16Q8N461 479 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 NKX2-3Q8TAU0 364 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 TMEM47Q9BQJ4 181 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 HOXC10Q9NYD6 342 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
GARNL3-204ENST00000429629 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-204ENST00000429629 EXOSC10Q01780 885 aaKnown RBP17.57■□□□□ 0.4
GARNL3-204ENST00000429629 TAF1CQ15572 869 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-204ENST00000429629 DHX32Q7L7V1 743 aaKnown RBP17.57■□□□□ 0.4
GARNL3-204ENST00000429629 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
GARNL3-204ENST00000429629 IGDCC4Q8TDY8 1250 aa17.57■□□□□ 0.4
GARNL3-204ENST00000429629 LAMB1P07942 1786 aa17.57■□□□□ 0.4
GARNL3-204ENST00000429629 TNKSO95271 1327 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 ERICH2A1L162 156 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 NDUFB10O96000 172 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 LIFRP42702 1097 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 COG2Q14746 738 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 SLFN13Q68D06 897 aa17.56■□□□□ 0.4
GARNL3-204ENST00000429629 ASCC2Q9H1I8 757 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-204ENST00000429629 RPAP3Q9H6T3 665 aaPredicted RBP17.56■□□□□ 0.4
GARNL3-204ENST00000429629 IFIT3O14879 490 aaKnown RBP17.55■□□□□ 0.4
GARNL3-204ENST00000429629 FDX1P10109 184 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-204ENST00000429629 ANTXR2P58335 489 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 IRX3P78415 501 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-204ENST00000429629 CRHR2Q13324 411 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
GARNL3-204ENST00000429629 C17orf99Q6UX52 265 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 IL27Q8NEV9 243 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
GARNL3-204ENST00000429629 GREB1LQ9C091 1923 aaPredicted RBP17.55■□□□□ 0.4
GARNL3-204ENST00000429629 ADGRA2Q96PE1 1338 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 PRC1O43663 620 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 SEC24BO95487 1268 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 HSPA1AP0DMV8 641 aaKnown RBP17.54■□□□□ 0.4
GARNL3-204ENST00000429629 HSPA1BP0DMV9 641 aaKnown RBP17.54■□□□□ 0.4
GARNL3-204ENST00000429629 BMP3P12645 472 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 IFIT1BQ5T764 474 aaKnown RBP17.54■□□□□ 0.4
GARNL3-204ENST00000429629 MB21D1Q8N884 522 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 CHURC1Q8WUH1 139 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 MAP3K14Q99558 947 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 P2RX7Q99572 595 aaKnown RBP17.54■□□□□ 0.4
GARNL3-204ENST00000429629 ZKSCAN3Q9BRR0 538 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 ZSWIM6Q9HCJ5 1215 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 PCNTO95613 3336 aa17.54■□□□□ 0.4
GARNL3-204ENST00000429629 GPR25O00155 361 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 SLC1A4P43007 532 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 HERVK_113P62684 666 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 DGKZQ13574 1117 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms